Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g00211 ATGAATCAACTAGTTTTAGTTCAGGCACAACAACAAACAGGTTTCATAAGCATTGATTGTGGAAGTTCAGAGAATTTATACACAGATGATGATACAAAAATAAAATACAGTTCAGATGGATCATACATACAAACAGGAGTTAACGGAAACATTTCTTCTCAGTATGCATATCCAGCCAATCCAACTCTACCATTACCACTCTCAGATCTCAGAAGTTTTCCTCAAGGAAACCGAAACTGTTACCAAATCACAGGAAGAAAAGGAAGTTTATATTTAATAAGAGCTACTTTCTTGTATGGAAACTACGACAGCAAAAAAAAATTACCCGAATTTGATCTCTATGTTGATGTAAATTTCTGGTCATCGGTGACATTTAAGAATGCTTCAGAACAAGTTACATTGGAAATAATCAGCAGGGCACAATCTGAAGAAATAGACGTTTGTCTTGTGAATAAAGGAAAGGGAATTCCGTTTATCTCAGGGTTGGAACTTAGACCGATTAGTACTCCTATTTACAACACTGAGTTTGGAGATTCTGCTTCACTTTTGCTTTTCAAAAGATGGGATATTGGTTCAATCAATGGAAGTGGTAGATATGAAGATGATGTTTATGATAGAATTTGGTTTCCTTTTGGTTCCTCTTCATGGAAATCTCTTAACAGTTCTGGAGAAATTGATGTTAATGGAGAGGGATATAGAGTACCATCTGAAGTTATGAGAACCTGTTCTACACCGAAGAATGAGAATGATTCTTTGGAGTTTTCTTGGACTTCAAATGATCCAAATACGATGTTTTATGTCTACTTGTACTTTGCTGAAGTGGAGAGACTTCAGAGAACTCAACTGAGAAAATTCAGTGTTTCTTGGAATGGTTCTCCTTTGAATACATCAGTAGTACCCAAATACTGGCAAGCAACCTCTCTTTCTAATTCAAAGTCGTTGGTCGCAAATGAACATAGAATTTCGATACAGAAAACCGAAGATTCGACGCTTCCACCTATTCTTAATGCAGTGGAGATTTATGTAGTTAGACAATCAGATGCACTTCCAACAATTGAAGAAGATGTTGAAGCTATAAAGAGTGTAAAAGAAAGTTATAGAGTTCAAAGAGATTGGTTTGGTGATCCATGTGAACCAAAGAACTACACTTGGGAAGGCTTAAAATGCAACTACAGCACTTCACTTTCTCCAAGAATTATATCACTGAATCTAAGCAGAAGCAGTCTGAGTGGAAGCATAACTCCTGCCATTTCCAATTTGACTTTCTTGGAATCTTTGGATTTAGATAACAATAGCTTAACCGGATCAATACCTCAGTTTTTGGAAGAATTGAAATCCCTTAAATATTTGAATTTAAGGGGCAACCAACTTTCAGGTTTTGTTTCTACCACTCTCCTAGAAAGATCAAAGAAGGGATTACTTACTTTGAGGGTGGATGATAAAAATCTCTCTGGTTCAAGTAAGAAAAAGAAGGTAATTGCTCCCATTGTTGCACCAGTTATATCAGTTTTAGTTCTGTTAGTGATTGCTATTCTCTATTGGAAGCTTAGAAGAAGAAATGAAAAATCAGAGGATGAGATGCGTATGATCAACAAAAGTGTAGGAACTGTAGTATCGAAGAAGTTACAATACACTTATGCTGAGGTATTGTCCATCACCAGAAACTTTGAATTGGTCATTGGGAGGGGAGGATTTGGAAGTGTTTATAGTGGTCAGATGAAAGATGGCAATAAAGTTGCAGTCAAAATGCTTTCTGCGTCTTCAGCTCAGGGCCCGAAGGAATTTCAAACCGAGGCTGAACTTTTGATGACTGTTCATCACAAAAATTTGGTATCCTTCATTGGCTATTGTGATGAAGGCGACAAGATGGCACTCATATACGAGTACTTGGCTAATGGCAACCTAAAAGAAAATCTCTCAGAAAAAAGTTCACATTGCTTGAGTTGGGAAAGGCGAATTCAAATAGCAATTGATGCTGCAGAGGGATTGGATTATCTACACCATGGATGCAAGCCACCTATAATACACAGAGATGTAAAATCGGCTAACATTCTTCTAAGTGAAGATTTAGAAGCTAAGATAGCAGATTTTGGACTCTCTAAGGTGTTTAAGAATAGTGATAATGGAAATTCAGAAACTGCAATTATTCATGTTGATGATAAAAATGAAAAATCTACAATCATGGGAACAATGGGGTACCTTGATCCAGAGTACTACAAACTAGGGAACTTGAATGAAAAAAGTGACATCTATAGCTATGGAATTGTACTATTGGAATTAATCACAGGTCTCCCTGCAGTGATCAAAGGAAAGCCATCAATTCACATACTTGAGTTTGTAAGACCACATCTTGCTGAAAAAAGTGATTTAAGCAATATTATAGATCCAAGACTCCAAGGAAAATTTGATGAAGATTCATGCTGGAAAATTTTAGGATTAGCACTTTCTTGCACTGCATCAACCTCAATTCAAAGACCAACAATGAGTGTTGTGTTATCTGAGCTTAAACAGTGTGTTAAAATGGAGTTTCCTAGTGATAGGGAAATATCTGAGCCATCAAGACATATTTACAGTGAATATTATACTTCATCTGATGCTTTTAATTCCATGGAGAGTGAATCTATGACACATCCTTTCCCAAGGTAA 2646 0.3647 MNQLVLVQAQQQTGFISIDCGSSENLYTDDDTKIKYSSDGSYIQTGVNGNISSQYAYPANPTLPLPLSDLRSFPQGNRNCYQITGRKGSLYLIRATFLYGNYDSKKKLPEFDLYVDVNFWSSVTFKNASEQVTLEIISRAQSEEIDVCLVNKGKGIPFISGLELRPISTPIYNTEFGDSASLLLFKRWDIGSINGSGRYEDDVYDRIWFPFGSSSWKSLNSSGEIDVNGEGYRVPSEVMRTCSTPKNENDSLEFSWTSNDPNTMFYVYLYFAEVERLQRTQLRKFSVSWNGSPLNTSVVPKYWQATSLSNSKSLVANEHRISIQKTEDSTLPPILNAVEIYVVRQSDALPTIEEDVEAIKSVKESYRVQRDWFGDPCEPKNYTWEGLKCNYSTSLSPRIISLNLSRSSLSGSITPAISNLTFLESLDLDNNSLTGSIPQFLEELKSLKYLNLRGNQLSGFVSTTLLERSKKGLLTLRVDDKNLSGSSKKKKVIAPIVAPVISVLVLLVIAILYWKLRRRNEKSEDEMRMINKSVGTVVSKKLQYTYAEVLSITRNFELVIGRGGFGSVYSGQMKDGNKVAVKMLSASSAQGPKEFQTEAELLMTVHHKNLVSFIGYCDEGDKMALIYEYLANGNLKENLSEKSSHCLSWERRIQIAIDAAEGLDYLHHGCKPPIIHRDVKSANILLSEDLEAKIADFGLSKVFKNSDNGNSETAIIHVDDKNEKSTIMGTMGYLDPEYYKLGNLNEKSDIYSYGIVLLELITGLPAVIKGKPSIHILEFVRPHLAEKSDLSNIIDPRLQGKFDEDSCWKILGLALSCTASTSIQRPTMSVVLSELKQCVKMEFPSDREISEPSRHIYSEYYTSSDAFNSMESESMTHPFPR 881
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g00211 881 Pfam Leucine rich repeat 401 457 IPR001611 GO:0005515
Vivi7g00211 881 ProSitePatterns Protein kinases ATP-binding region signature. 560 582 IPR017441 GO:0005524
Vivi7g00211 881 SUPERFAMILY Protein kinase-like (PK-like) 539 835 IPR011009 -
Vivi7g00211 881 CDD STKc_IRAK 560 837 - -
Vivi7g00211 881 Pfam Malectin-like domain 18 342 IPR024788 -
Vivi7g00211 881 Gene3D Transferase(Phosphotransferase) domain 1 630 856 - -
Vivi7g00211 881 PANTHER OS07G0107800 PROTEIN-RELATED 16 839 - -
Vivi7g00211 881 SUPERFAMILY L domain-like 381 485 - -
Vivi7g00211 881 Gene3D Phosphorylase Kinase; domain 1 536 629 - -
Vivi7g00211 881 SMART serkin_6 554 839 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g00211 881 ProSitePatterns Serine/Threonine protein kinases active-site signature. 674 686 IPR008271 GO:0004672|GO:0006468
Vivi7g00211 881 FunFam PTI1-like tyrosine-protein kinase 3 630 848 - -
Vivi7g00211 881 FunFam Leucine-rich repeat receptor-like kinase 352 486 - -
Vivi7g00211 881 FunFam Leucine-rich repeat receptor-like protein kinase 531 629 - -
Vivi7g00211 881 Pfam Protein tyrosine and serine/threonine kinase 558 835 IPR001245 GO:0004672|GO:0006468
Vivi7g00211 881 ProSiteProfiles Protein kinase domain profile. 554 880 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g00211 881 Gene3D Ribonuclease Inhibitor 346 486 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g00211 Vivi-Chr7 12471400 12477847 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g00211 5 864 Receptor kinase-like Gene Family AT4G29180 49.943 0.0 861
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Vivi7g00211 Malectin_like 1.7e-105 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g00211 - - gmx:100793137 1197.19