Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g00210 ATGAATCAACTAGGTTTCATAAGCATTGATTGTGGAAGTTCAGAGAATTTATACACAGATGATGATACAAAAATAAAATACAGTTCAGATGGATCATACATACAAACAGGAGTTAACGGAAACATTTCTTCTCAGTATGCATATCCAGCCAATCCAACTCTACCATTACCACTCTCAGATCTCAGAAGTTTTCCTCAAGGAAACCGAAACTGTTACCAAATCACAGGAAGAAAAGGAAGTTTATATTTAATAAGAGCTACTTTCTTGTATGGAAACTACGACAGCAAAAAAAAATTACCCGAATTTGATCTCTATGTTGATGTAAATTTCTGGTCATCGGTGACATTTAAGAATGCTTCAGAACAAGTTACATTGGAAATAATCAGCAGGGCACAATCTGAAGAAATAGACGTTTGTCTTGTGAATAAAGGAAAGGGAATTCCGTTTATCTCAGGGTTGGAACTTAGACCGATTAGTACTCCTATTTACAACACTGAGTTTGGAGATTCTGCTTCACTTTTGCTTTTCAAAAGATGGGATATTGGTTCAATCAATGGAAGTGGTAGATATGAAGATGATGTTTATGATAGAATTTGGTTTCCTTTTGGTTCCTCTTCATGGAAATCTCTTAACAGTTCTGGAGAAATTGATGTTAATGGAGAGGGATATAGAGTACCATCTGAAGTTATGAGAACCTGTTCTACACCGAAGAATGAGAATGATTCTTTGGAGTTTTCTTGGACTTCAAATGATCCAAATACGATGTTTTATGTCTACTTGTACTTTGCTGAAGTGGAGAGACTTCAGAGAACTCAACTGAGAAAATTCAGTGTTTCTTGGAATGGTTCTCCTTTGAATACATCAGTAGTACCCAAATACTGGCAAGCAACCTCTCTTTCTAATTCAAAGTCGTTGGTCGCAAATGAACATAGAATTTCGATACAGAAAACCGAAGATTCGACGCTTCCACCTATTCTTAATGCAGTGGAGATTTATGTAGTTAGACAATCAGATGCACTTCCAACAATTGAAGAAGATGTTGAAGCTATAAAGAGTGTAAAAGAAAGTTATAGAGTTCAAAGAGATTGGTTTGGTGATCCATGTGAACCAAAGAACTACACTTGGGAAGGCTTAAAATGCAACTACAGCACTTCACTTTCTCCAAGAATTATATCACTGAATCTAAGCAGAAGCAGTCTGAGTGGAAGCATAACTCCTGCCATTTCCAATTTGACTTTCTTGGAATCTTTGGATTTAGATAACAATAGCTTAACCGGATCAATACCTCAGTTTTTGGAAGAATTGAAATCCCTTAAATATTTGAATTTAAGGGGCAACCAACTTTCAGGTTTTGTTTCTACCACTCTCCTAGAAAGATCAAAGAAGGGATTACTTACTTTGAGGGTGGATGATAAAAATCTCTCTGGTTCAAGTAAGAAAAAGAAGGTAATTGCTCCCATTGTTGCACCAGTTATATCAGTTTTAGTTCTGTTAGTGATTGCTATTCTCTATTGGAAGCTTAGAAGAAGAAATGAAAAATCAGAGGATGAGATGCGTATGATCAACAAAAGTGTAGGAACTGTAGTATCGAAGAAGTTACAATACACTTATGCTGAGGTATTGTCCATCACCAGAAACTTTGAATTGGTCATTGGGAGGGGAGGATTTGGAAGTGTTTATAGTGGTCAGATGAAAGATGGCAATAAAGTTGCAGTCAAAATGCTTTCTGCGTCTTCAGCTCAGGGCCCGAAGGAATTTCAAACCGAGGCTGAACTTTTGATGACTGTTCATCACAAAAATTTGGTATCCTTCATTGGCTATTGTGATGAAGGCGACAAGATGGCACTCATATACGAGTACTTGGCTAATGGCAACCTAAAAGAAAATCTCTCAGAAAAAAGTTCACATTGCTTGAGTTGGGAAAGGCGAATTCAAATAGCAATTGATGCTGCAGAGGGATTGGATTATCTACACCATGGATGCAAGCCACCTATAATACACAGAGATGTAAAATCGGCTAACATTCTTCTAAGTGAAGATTTAGAAGCTAAGATAGCAGATTTTGGACTCTCTAAGGTGTTTAAGAATAGTGATAATGGAAATTCAGAAACTGCAATTATTCATGTTGATGATAAAAATGAAAAATCTACAATCATGGGAACAATGGGGTACCTTGATCCAGAGTACTACAAACTAGGGAACTTGAATGAAAAAAGTGACATCTATAGCTATGGAATTGTACTATTGGAATTAATCACAGGTCTCCCTGCAGTGATCAAAGGAAAGCCATCAATTCACATACTTGAGTTTGTAAGACCACATCTTGCTGAAAAAAGTGATTTAAGCAATATTATAGATCCAAGACTCCAAGGAAAATTTGATGAAGATTCATGCTGGAAAATTTTAGGATTAGCACTTTCTTGCACTGCATCAACCTCAATTCAAAGACCAACAATGAGTGTTGTGTTATCTGAGCTTAAACAGTGTGTTAAAATGGAGTTTCCTAGTGATAGGGAAATATCTGAGCCATCAAGACATATTTACAGTGAATATTATACTTCATCTGATGCTTTTAATTCCATGGAGAGTGAATCTATGACACATCCTTTCCCAAGGTAA 2619 0.3646 MNQLGFISIDCGSSENLYTDDDTKIKYSSDGSYIQTGVNGNISSQYAYPANPTLPLPLSDLRSFPQGNRNCYQITGRKGSLYLIRATFLYGNYDSKKKLPEFDLYVDVNFWSSVTFKNASEQVTLEIISRAQSEEIDVCLVNKGKGIPFISGLELRPISTPIYNTEFGDSASLLLFKRWDIGSINGSGRYEDDVYDRIWFPFGSSSWKSLNSSGEIDVNGEGYRVPSEVMRTCSTPKNENDSLEFSWTSNDPNTMFYVYLYFAEVERLQRTQLRKFSVSWNGSPLNTSVVPKYWQATSLSNSKSLVANEHRISIQKTEDSTLPPILNAVEIYVVRQSDALPTIEEDVEAIKSVKESYRVQRDWFGDPCEPKNYTWEGLKCNYSTSLSPRIISLNLSRSSLSGSITPAISNLTFLESLDLDNNSLTGSIPQFLEELKSLKYLNLRGNQLSGFVSTTLLERSKKGLLTLRVDDKNLSGSSKKKKVIAPIVAPVISVLVLLVIAILYWKLRRRNEKSEDEMRMINKSVGTVVSKKLQYTYAEVLSITRNFELVIGRGGFGSVYSGQMKDGNKVAVKMLSASSAQGPKEFQTEAELLMTVHHKNLVSFIGYCDEGDKMALIYEYLANGNLKENLSEKSSHCLSWERRIQIAIDAAEGLDYLHHGCKPPIIHRDVKSANILLSEDLEAKIADFGLSKVFKNSDNGNSETAIIHVDDKNEKSTIMGTMGYLDPEYYKLGNLNEKSDIYSYGIVLLELITGLPAVIKGKPSIHILEFVRPHLAEKSDLSNIIDPRLQGKFDEDSCWKILGLALSCTASTSIQRPTMSVVLSELKQCVKMEFPSDREISEPSRHIYSEYYTSSDAFNSMESESMTHPFPR 872
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g00210 872 ProSitePatterns Protein kinases ATP-binding region signature. 551 573 IPR017441 GO:0005524
Vivi7g00210 872 FunFam Leucine-rich repeat receptor-like kinase 343 477 - -
Vivi7g00210 872 Pfam Malectin-like domain 9 333 IPR024788 -
Vivi7g00210 872 FunFam Leucine-rich repeat receptor-like protein kinase 522 620 - -
Vivi7g00210 872 CDD STKc_IRAK 551 828 - -
Vivi7g00210 872 Pfam Protein tyrosine and serine/threonine kinase 549 826 IPR001245 GO:0004672|GO:0006468
Vivi7g00210 872 Pfam Leucine rich repeat 392 448 IPR001611 GO:0005515
Vivi7g00210 872 SUPERFAMILY Protein kinase-like (PK-like) 530 826 IPR011009 -
Vivi7g00210 872 Gene3D Phosphorylase Kinase; domain 1 527 620 - -
Vivi7g00210 872 Gene3D Transferase(Phosphotransferase) domain 1 621 847 - -
Vivi7g00210 872 Gene3D Ribonuclease Inhibitor 337 477 IPR032675 -
Vivi7g00210 872 SMART serkin_6 545 830 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g00210 872 FunFam PTI1-like tyrosine-protein kinase 3 621 839 - -
Vivi7g00210 872 SUPERFAMILY L domain-like 372 476 - -
Vivi7g00210 872 ProSitePatterns Serine/Threonine protein kinases active-site signature. 665 677 IPR008271 GO:0004672|GO:0006468
Vivi7g00210 872 PANTHER OS07G0107800 PROTEIN-RELATED 7 830 - -
Vivi7g00210 872 ProSiteProfiles Protein kinase domain profile. 545 871 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g00210 Vivi-Chr7 12471400 12477847 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g00210 3 855 Receptor kinase-like Gene Family AT4G29180 50.114 0.0 854
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Vivi7g00210 Malectin_like 1.6e-105 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g00210 - - gmx:100793137 1189.48