Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g00203 ATGTTTGTCTCTGAGTCTAAGAAGCAATGCAAACGTGAAACTCCAATATTCCCTATTTGGCGATTTGAAGAAATGGTGTTATCAGCTTCGCCATGTTCTCTTACCAGAAGCTCCTTGGAAGAGATGTTAGATTCGCTTCGGCGGAGGGATGAAGACGAAGCCAACAACAAGGAGTCCCCGCCTGCTTTGCCATCCCGCCCAGCATCCAAGGCTCGCCTCCCGCCCGCCAGGCGCTCATTGCCCAATAATTTTAAGGTCTGCAACGCTGGATTTAATGACAATGTGGAAACTAAGAGGAAGGAAACATCATACAAGACAAGACAAACCAGTTTTGGGAGAAAGAGAGTCAAGATGGATATTCTCGACTCACCTTATGTGCCACCTATTTCACAATTCCATACTGACACTCTTTCTTATTTCATTCAAATGAAGCTTAGTGTTTGGTGTAGGCAACCAACAACAGGGCAATGGGAGCTAGGCTCAATACACTCAACTTCTGGAGACCAAGTATCTGTTTCACTCTCAAACGGAAAAGTGCTCAATTTACCTAGATCAGAACTTGTACCAGCTAATCCCAATCTTTTAGATGCCGTGGATGACCTTATTAAACTCGCTTATTTGAATCACCCCTCCGTTCTTCACAATCTTAGGTTTAGATATTCTCATGACATGATTTATAGTAAAGCAGGGCCCATTTTAATTGCACTCAATCCTTTCAAAGATCTCCAAATTTATGGAAATGATTACGTTTCCACTTATAGGCAACAACTTGTTGATACTCCTCATGTTTATGGTATGGTAGATGCAGCTTATAACCAGATGATGACAAATGAAGTAGATCAGTCCATTATCACAAGTGGTGAGAGTGGATCTGGAAAGACAGAGACAGCTAAAATTGCTATACAATACTTAGCTTCTCTTGGTAGTGGCAGTAGTGGGACAACAAATGTTGTTCTTCAAACAAATTGTATACTAGAAACTTTTGGGAATGCAAAAACATCTGTGAATGACAACTCATCCAGATTTGGAAAGTTTATGGAAATTCATTTCAGTGCCACGGGTAAAATATGTGGGGCTAAAATTCAAACCTATTTGTTGGAAAAGTCAAGAGTTGTTCAAGTGGCCAATGGTGAGAGGTCGTATCATGTACTTTATCAACTTTGTGCTGGATCTTCATCTAGTCTTAAAGAGAGACTAAATCTTAGAGCAGCCCATGAATATAAATATCTAAATCAAAGTGACTGCATCACTATTGGTGGTATTGACGATGCTAGAAACTTTCATCAGCTGATGGAAGCATTTGATGCTGTTCGAATTAGTAAAGAGGACCAAGAGCTGATCTTTAAAGTGCTTGCTGCAATATTATGGCTGGGAAATATATCATTCAAAGTCACTGACAGTGAAAATCACATCGAGGTTGTGGGTGATGAAGCTGTAACCAGTGCTGCCCTGCTGATGGGTTGCAGTTCCCAGGACTTAATGGCAGCATTATCTACCCATAAAATCCAATCTGACAAAGAAACTGTTGTTGCCAAAAGATTGACATTATTGCAGGCCATTGAAACAAAAGATGCAATTGCCAAATTTATTTATTCAAGCTTGTTTGAATGGATAGTACAACAACTTAACAGGTTACTTGAAGTGAATGAAAAGCATACAGAGAAATCCATTAGTATCCTTGATTTTTATGGGTTTCAGTCATTCCAGAAGAACAACTTCGAGCAATTTTGTATAAATTATGCTAATGAAAGGCTTCAACAACATTTTAATCGGCATCTGTTTAAACTTGAGCTGGAGGACTGTGAATCAGATGGCATTGATTGTTCAGTATTAGATTTTGGGGACAATCAAGAGTGCTTGGATCTATTTGAGAAGAAACCTCTCAGTCTACTCTCTTTATTGGATGATGAATCAAATTTTGCTGAGGCTTCTGATTTAACATTTGTCAACAGACTTAAGGACCTCCTGGAAGCTAATAATTGCTTCAAAGGGGAAAGAGGCAGGGCTTTTAGTGTACGTCACTATGCAGGGGAGGTTTTGTATGATACTAATGACTTTCTAGTAAAGAACAGAGATACGTATGATAATTCTATTCAACTCCTTTCATCATGTAATTGTGAACTGCTGAAGTTGTTCTCCAAAGTGATTAACCAACCCGAGGAGCAAGGAAACTCCACTTTCCATGTTGGAGCACTATACTCACAGAAGAGAGGTGTTGGAACAAAGTTCAAGGATCAATTGTTTAAGTTGATTCATCAATTGGAGAACACCACTCCTCACTTTATTCGCTGCATAAAGCCAAATACTACGAACCTTCCTGGAATTTATGACAAGGAACTTGTCCTACAACAGCTCAGATGTTGTGGAGTTCTAGAAGCTGTTAAAATTTCAAAGGCTGGATTTCCTACTCGAGTGAACCATCAAGAATTTTCCAGAAGGTACGGGTTTCTGCTTTCTAAGACTGACATACCTCGGGATCCGTTGAGCGTCTCAGTTGCAGTTTTGCAAAAATTTAATATCCCTTCTGAAATGTACCAAGTTGGCTACACAAAACTATATCTTCGAGCAGGGCAGATTGGTGCGCTGGAGGATAAGAGAAAACAGTTTTTGCGGGGAGTACTTGGGATTCAAAAATGCTTCCGTGGTCATCAAGCCCGCAGTTATTTCTGTAAACTTAGGAATGGAGTGACAGCATTACAATCATTTATACGTGGAGACATTGCAAGAAAGAAACATGGTGTTTTGATGAAATCTTCCATAACAATTTATTCTAAAAAACTAGAGGAGATTTATGGAATCATAGTACTTCAATCTGTGATTCGTGGGTGGTTGGTTCGAAGGGATTCTAGTTACATCAATAAATTGAGGAACTATCATGAAAATGAAAATTCTCGACGGAACTTTTGTGTTAAGATGCCAGAAGTTGAGCAGGATTTGTCCCAAGAGCTGCTTCAGAACATGCCTTCAGCTTTAGCAGAACTACAAAAACGTGCATACGAAGCAGAAGCAGTTGTGGAGCAAAAGGAAGAAGAAAATACAGAATTGAGGGAACAACTAAAACAATCGGAGAGAAAGAGGGTTGAATATGAGAAAAAGATGAAGTCAATGGAGGAGGTGTGGCAAAAGCAGATGGCATCCTTGCAATCGAGTCTTGTTTCTGCTAGAAAGAGCCTTGCTTCAGAGAATGGCACTGTTCAACCTGTAAGACATGAACTTGTGTCACCTCGCTACTATGATTCTGAAGATGCCTCTTCTATGGGATCTCGAACAACTAGTGGGAGCACACCTATGTTGCTTTCTGGTAGTTTCTCCGTCTCTGATGCGGGGAGGCAAGCTAATGGTACTTTGACAACTGTAAGCAATCTGATGAAGGAATTTGAGCAGCAAAGACAAACCTTCAACGATGAAGTTAAAGCTTTGAATGAGATTAAACCAGGGCAGTCTGCCAACACGAGCTCCGCTGATGAACTTCGGAAACTTAAACAAAGATTCGAGGGATGGAAGAAACAATATAAGGTTAGATTACGGGAAACAAAAGCAAGGCTTTCCGAATCCGAAAAAAGTCGACGGACATGGTGGGGAAAATTAAGCTTAAGAGCATAA 3603 0.4013 MFVSESKKQCKRETPIFPIWRFEEMVLSASPCSLTRSSLEEMLDSLRRRDEDEANNKESPPALPSRPASKARLPPARRSLPNNFKVCNAGFNDNVETKRKETSYKTRQTSFGRKRVKMDILDSPYVPPISQFHTDTLSYFIQMKLSVWCRQPTTGQWELGSIHSTSGDQVSVSLSNGKVLNLPRSELVPANPNLLDAVDDLIKLAYLNHPSVLHNLRFRYSHDMIYSKAGPILIALNPFKDLQIYGNDYVSTYRQQLVDTPHVYGMVDAAYNQMMTNEVDQSIITSGESGSGKTETAKIAIQYLASLGSGSSGTTNVVLQTNCILETFGNAKTSVNDNSSRFGKFMEIHFSATGKICGAKIQTYLLEKSRVVQVANGERSYHVLYQLCAGSSSSLKERLNLRAAHEYKYLNQSDCITIGGIDDARNFHQLMEAFDAVRISKEDQELIFKVLAAILWLGNISFKVTDSENHIEVVGDEAVTSAALLMGCSSQDLMAALSTHKIQSDKETVVAKRLTLLQAIETKDAIAKFIYSSLFEWIVQQLNRLLEVNEKHTEKSISILDFYGFQSFQKNNFEQFCINYANERLQQHFNRHLFKLELEDCESDGIDCSVLDFGDNQECLDLFEKKPLSLLSLLDDESNFAEASDLTFVNRLKDLLEANNCFKGERGRAFSVRHYAGEVLYDTNDFLVKNRDTYDNSIQLLSSCNCELLKLFSKVINQPEEQGNSTFHVGALYSQKRGVGTKFKDQLFKLIHQLENTTPHFIRCIKPNTTNLPGIYDKELVLQQLRCCGVLEAVKISKAGFPTRVNHQEFSRRYGFLLSKTDIPRDPLSVSVAVLQKFNIPSEMYQVGYTKLYLRAGQIGALEDKRKQFLRGVLGIQKCFRGHQARSYFCKLRNGVTALQSFIRGDIARKKHGVLMKSSITIYSKKLEEIYGIIVLQSVIRGWLVRRDSSYINKLRNYHENENSRRNFCVKMPEVEQDLSQELLQNMPSALAELQKRAYEAEAVVEQKEEENTELREQLKQSERKRVEYEKKMKSMEEVWQKQMASLQSSLVSARKSLASENGTVQPVRHELVSPRYYDSEDASSMGSRTTSGSTPMLLSGSFSVSDAGRQANGTLTTVSNLMKEFEQQRQTFNDEVKALNEIKPGQSANTSSADELRKLKQRFEGWKKQYKVRLRETKARLSESEKSRRTWWGKLSLRA 1200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g00203 1200 SMART MYSc_2a 190 868 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vivi7g00203 1200 Coils Coil 991 1039 - -
Vivi7g00203 1200 Gene3D - 801 868 - -
Vivi7g00203 1200 SMART iq_5 928 950 IPR000048 GO:0005515
Vivi7g00203 1200 SMART iq_5 868 890 IPR000048 GO:0005515
Vivi7g00203 1200 SMART iq_5 891 913 IPR000048 GO:0005515
Vivi7g00203 1200 Coils Coil 1123 1143 - -
Vivi7g00203 1200 ProSiteProfiles IQ motif profile. 892 921 IPR000048 GO:0005515
Vivi7g00203 1200 ProSiteProfiles Myosin motor domain profile. 196 867 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vivi7g00203 1200 CDD MYSc_Myo8 210 855 IPR036022 -
Vivi7g00203 1200 Gene3D - 873 918 - -
Vivi7g00203 1200 Pfam Myosin head (motor domain) 198 855 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vivi7g00203 1200 FunFam Myosin heavy chain 379 435 - -
Vivi7g00203 1200 Gene3D Kinesin motor domain 196 800 IPR036961 -
Vivi7g00203 1200 Gene3D Myosin VI head, motor domain, U50 subdomain 436 545 - -
Vivi7g00203 1200 MobiDBLite consensus disorder prediction 49 81 - -
Vivi7g00203 1200 ProSiteProfiles IQ motif profile. 929 957 IPR000048 GO:0005515
Vivi7g00203 1200 Pfam IQ calmodulin-binding motif 873 889 IPR000048 GO:0005515
Vivi7g00203 1200 Pfam IQ calmodulin-binding motif 933 947 IPR000048 GO:0005515
Vivi7g00203 1200 Gene3D - 379 435 - -
Vivi7g00203 1200 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 168 916 IPR027417 -
Vivi7g00203 1200 Coils Coil 1168 1188 - -
Vivi7g00203 1200 PRINTS Myosin heavy chain signature 280 305 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vivi7g00203 1200 PRINTS Myosin heavy chain signature 609 637 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vivi7g00203 1200 PRINTS Myosin heavy chain signature 556 584 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vivi7g00203 1200 PRINTS Myosin heavy chain signature 226 245 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vivi7g00203 1200 PRINTS Myosin heavy chain signature 323 350 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vivi7g00203 1200 Gene3D - 568 757 - -
Vivi7g00203 1200 PANTHER MYOSIN 191 1185 - -
Vivi7g00203 1200 ProSiteProfiles IQ motif profile. 871 898 IPR000048 GO:0005515
Vivi7g00203 1200 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 142 192 IPR004009 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g00203 Vivi-Chr7 11749585 11779002 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g00203 25 1195 Myosins gene family AT5G54280 54.274 0.0 1313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g00203 K10357 - gmx:100802074 1587.78