Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g00201 ATGTTTGTCTCTGAGTCTAAGAAGCAATGCAAACGTGAAACTCCAATATTCCCTATTTGGCGATTTGAAGAAATGGTGTTATCAGCTTCGCCATGTTCTCTTACCAGAAGCTCCTTGGAAGAGATGTTAGATTCGCTTCGGCGGAGGGATGAAGACGAAGCCAACAACAAGGAGTCCCCGCCTGCTTTGCCATCCCGCCCAGCATCCAAGGCTCGCCTCCCGCCCGCCAGGCGCTCATTGCCCAATAATTTTAAGGTCTGCAACGCTGGATTTAATGACAATGTGGAAACTAAGAGGAAGGAAACATCATACAAGACAAGACAAACCAGTTTTGGGAGAAAGAGAGTCAAGATGGATATTCTCGACTCACCTTATGTGCCACCTATTTCACAATTCCATACTGACACTCTTTCTTATTTCATTCAAATGAAGCTTAGTGTTTGGTGTAGGCAACCAACAACAGGGCAATGGGAGCTAGGCTCAATACACTCAACTTCTGGAGACCAAGTATCTGTTTCACTCTCAAACGGAAAAGTGCTCAATTTACCTAGATCAGAACTTGTACCAGCTAATCCCAATCTTTTAGATGCCGTGGATGACCTTATTAAACTCGCTTATTTGAATCACCCCTCCGTTCTTCACAATCTTAGGTTTAGATATTCTCATGACATGATTTATAGTAAAGCAGGGCCCATTTTAATTGCACTCAATCCTTTCAAAGATCTCCAAATTTATGGAAATGATTACGTTTCCACTTATAGGCAACAACTTGTTGATACTCCTCATGTTTATGGTATGGTAGATGCAGCTTATAACCAGATGATGACAAATGAAGTAGATCAGTCCATTATCACAAGTGGTGAGAGTGGATCTGGAAAGACAGAGACAGCTAAAATTGCTATACAATACTTAGCTTCTCTTGGTAGTGGCAGTAGTGGGACAACAAATGTTGTTCTTCAAACAAATTGTATACTAGAAACTTTTGGGAATGCAAAAACATCTGTGAATGACAACTCATCCAGATTTGGAAAGTTTATGGAAATTCATTTCAGTGCCACGGGTAAAATATGTGGGGCTAAAATTCAAACCTATTTGTTGGAAAAGTCAAGAGTTGTTCAAGTGGCCAATGGTGAGAGGTCGTATCATGTACTTTATCAACTTTGTGCTGGATCTTCATCTAGTCTTAAAGAGAGACTAAATCTTAGAGCAGCCCATGAATATAAATATCTAAATCAAAGTGACTGCATCACTATTGGTGGTATTGACGATGCTAGAAACTTTCATCAGCTGATGGAAGCATTTGATGCTGTTCGAATTAGTAAAGAGGACCAAGAGCTGATCTTTAAAGTGCTTGCTGCAATATTATGGCTGGGAAATATATCATTCAAAGTCACTGACAGTGAAAATCACATCGAGGTTGTGGGTGATGAAGCTGTAACCAGTGCTGCCCTGCTGATGGGTTGCAGTTCCCAGGACTTAATGGCAGCATTATCTACCCATAAAATCCAATCTGACAAAGAAACTGTTGTTGCCAAAAGATTGACATTATTGCAGGCCATTGAAACAAAAGATGCAATTGCCAAATTTATTTATTCAAGCTTGTTTGAATGGATAGTACAACAACTTAACAGGTTACTTGAAGTGAATGAAAAGCATACAGAGAAATCCATTAGTATCCTTGATTTTTATGGGTTTCAGTCATTCCAGTTTCTTGTTTCTTACTTTCAGAAGAACAACTTCGAGCAATTTTGTATAAATTATGCTAATGAAAGGCTTCAACAACATTTTAATCGGCATCTGTTTAAACTTGAGCTGGAGGACTGTGAATCAGATGGCATTGATTGTTCAGTATTAGATTTTGGGGACAATCAAGAGTGCTTGGATCTATTTGAGAAGAAACCTCTCAGTCTACTCTCTTTATTGGATGATGAATCAAATTTTGCTGAGGCTTCTGATTTAACATTTGTCAACAGACTTAAGGACCTCCTGGAAGCTAATAATTGCTTCAAAGGGGAAAGAGGCAGGGCTTTTAGTGTACGTCACTATGCAGGGGAGGTTTTGTATGATACTAATGACTTTCTAGTAAAGAACAGAGATACGTATGATAATTCTATTCAACTCCTTTCATCATGTAATTGTGAACTGCTGAAGTTGTTCTCCAAAGTGATTAACCAACCCGAGGAGCAAGGAAACTCCACTTTCCATGTTGGAGCACTATACTCACAGAAGAGAGGTGTTGGAACAAAGTTCAAGGATCAATTGTTTAAGTTGATTCATCAATTGGAGAACACCACTCCTCACTTTATTCGCTGCATAAAGCCAAATACTACGAACCTTCCTGGAATTTATGACAAGGAACTTGTCCTACAACAGCTCAGATGTTGTGGAGTTCTAGAAGCTGTTAAAATTTCAAAGGCTGGATTTCCTACTCGAGTGAACCATCAAGAATTTTCCAGAAGGTACGGGTTTCTGCTTTCTAAGACTGACATACCTCGGGATCCGTTGAGCGTCTCAGTTGCAGTTTTGCAAAAATTTAATATCCCTTCTGAAATGTACCAAGTTGGCTACACAAAACTATATCTTCGAGCAGGGCAGATTGGTGCGCTGGAGGATAAGAGAAAACAGTTTTTGCGGGGAGTACTTGGGATTCAAAAATGCTTCCGTGGTCATCAAGCCCGCAGTTATTTCTGTAAACTTAGGAATGGAGTGACAGCATTACAATCATTTATACGTGGAGACATTGCAAGAAAGAAACATGGTGTTTTGATGAAATCTTCCATAACAATTTATTCTAAAAAACTAGAGGAGATTTATGGAATCATAGTACTTCAATCTGTGATTCGTGGGTGGTTGGTTCGAAGGGATTCTAGTTACATCAATAAATTGAGGAACTATCATGAAAATGAAAATTCTCGACGGAACTTTTGTGTTAAGATGCCAGAAGTTGAGCAGGATTTGTCCCAAGAGCTGCTTCAGAACATGCCTTCAGCTTTAGCAGAACTACAAAAACGTGCATACGAAGCAGAAGCAGTTGTGGAGCAAAAGGAAGAAGAAAATACAGAATTGAGGGAACAACTAAAACAATCGGAGAGAAAGAGGGTTGAATATGAGAAAAAGATGAAGTCAATGGAGGAGGTGTGGCAAAAGCAGATGGCATCCTTGCAATCGAGTCTTGTTTCTGCTAGAAAGAGCCTTGCTTCAGAGAATGGCACTGTTCAACCTGTAAGACATGAACTTGTGTCACCTCGCTACTATGATTCTGAAGATGCCTCTTCTATGGGATCTCGAACAACTAGTGGGAGCACACCTATGTTGCTTTCTGGTAGTTTCTCCGTCTCTGATGCGGGGAGGCAAGCTAATGGTACTTTGACAACTGTAAGCAATCTGATGAAGGAATTTGAGCAGCAAAGACAAACCTTCAACGATGAAGTTAAAGCTTTGAATGAGATTAAACCAGGGCAGTCTGCCAACACGAGCTCCGCTGATGAACTTCGGAAACTTAAACAAAGATTCGAGGGATGGAAGAAACAATATAAGGTTAGATTACGGGAAACAAAAGCAAGGCTTTCCGAATCCGAAAAAAGTCGACGGACATGGTGGGGAAAATTAAGCTTAAGAGCATAA 3624 0.4007 MFVSESKKQCKRETPIFPIWRFEEMVLSASPCSLTRSSLEEMLDSLRRRDEDEANNKESPPALPSRPASKARLPPARRSLPNNFKVCNAGFNDNVETKRKETSYKTRQTSFGRKRVKMDILDSPYVPPISQFHTDTLSYFIQMKLSVWCRQPTTGQWELGSIHSTSGDQVSVSLSNGKVLNLPRSELVPANPNLLDAVDDLIKLAYLNHPSVLHNLRFRYSHDMIYSKAGPILIALNPFKDLQIYGNDYVSTYRQQLVDTPHVYGMVDAAYNQMMTNEVDQSIITSGESGSGKTETAKIAIQYLASLGSGSSGTTNVVLQTNCILETFGNAKTSVNDNSSRFGKFMEIHFSATGKICGAKIQTYLLEKSRVVQVANGERSYHVLYQLCAGSSSSLKERLNLRAAHEYKYLNQSDCITIGGIDDARNFHQLMEAFDAVRISKEDQELIFKVLAAILWLGNISFKVTDSENHIEVVGDEAVTSAALLMGCSSQDLMAALSTHKIQSDKETVVAKRLTLLQAIETKDAIAKFIYSSLFEWIVQQLNRLLEVNEKHTEKSISILDFYGFQSFQFLVSYFQKNNFEQFCINYANERLQQHFNRHLFKLELEDCESDGIDCSVLDFGDNQECLDLFEKKPLSLLSLLDDESNFAEASDLTFVNRLKDLLEANNCFKGERGRAFSVRHYAGEVLYDTNDFLVKNRDTYDNSIQLLSSCNCELLKLFSKVINQPEEQGNSTFHVGALYSQKRGVGTKFKDQLFKLIHQLENTTPHFIRCIKPNTTNLPGIYDKELVLQQLRCCGVLEAVKISKAGFPTRVNHQEFSRRYGFLLSKTDIPRDPLSVSVAVLQKFNIPSEMYQVGYTKLYLRAGQIGALEDKRKQFLRGVLGIQKCFRGHQARSYFCKLRNGVTALQSFIRGDIARKKHGVLMKSSITIYSKKLEEIYGIIVLQSVIRGWLVRRDSSYINKLRNYHENENSRRNFCVKMPEVEQDLSQELLQNMPSALAELQKRAYEAEAVVEQKEEENTELREQLKQSERKRVEYEKKMKSMEEVWQKQMASLQSSLVSARKSLASENGTVQPVRHELVSPRYYDSEDASSMGSRTTSGSTPMLLSGSFSVSDAGRQANGTLTTVSNLMKEFEQQRQTFNDEVKALNEIKPGQSANTSSADELRKLKQRFEGWKKQYKVRLRETKARLSESEKSRRTWWGKLSLRA 1207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g00201 1207 Coils Coil 1175 1195 - -
Vivi7g00201 1207 CDD MYSc_Myo8 210 862 IPR036022 -
Vivi7g00201 1207 Gene3D - 807 875 - -
Vivi7g00201 1207 Gene3D - 379 438 - -
Vivi7g00201 1207 Gene3D Myosin VI head, motor domain, U50 subdomain 440 742 - -
Vivi7g00201 1207 PRINTS Myosin heavy chain signature 280 305 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vivi7g00201 1207 PRINTS Myosin heavy chain signature 616 644 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vivi7g00201 1207 PRINTS Myosin heavy chain signature 226 245 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vivi7g00201 1207 PRINTS Myosin heavy chain signature 563 591 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vivi7g00201 1207 PRINTS Myosin heavy chain signature 323 350 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vivi7g00201 1207 ProSiteProfiles Myosin motor domain profile. 196 874 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vivi7g00201 1207 Gene3D - 880 925 - -
Vivi7g00201 1207 PANTHER MYOSIN 191 1192 - -
Vivi7g00201 1207 Gene3D - 572 764 - -
Vivi7g00201 1207 Coils Coil 1130 1150 - -
Vivi7g00201 1207 ProSiteProfiles IQ motif profile. 936 964 IPR000048 GO:0005515
Vivi7g00201 1207 SMART MYSc_2a 190 875 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vivi7g00201 1207 FunFam Myosin heavy chain 379 435 - -
Vivi7g00201 1207 ProSiteProfiles IQ motif profile. 878 905 IPR000048 GO:0005515
Vivi7g00201 1207 ProSiteProfiles IQ motif profile. 899 928 IPR000048 GO:0005515
Vivi7g00201 1207 MobiDBLite consensus disorder prediction 49 81 - -
Vivi7g00201 1207 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 168 923 IPR027417 -
Vivi7g00201 1207 Gene3D Kinesin motor domain 199 803 IPR036961 -
Vivi7g00201 1207 Pfam Myosin head (motor domain) 198 862 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vivi7g00201 1207 SMART iq_5 875 897 IPR000048 GO:0005515
Vivi7g00201 1207 SMART iq_5 898 920 IPR000048 GO:0005515
Vivi7g00201 1207 SMART iq_5 935 957 IPR000048 GO:0005515
Vivi7g00201 1207 Coils Coil 998 1046 - -
Vivi7g00201 1207 Pfam IQ calmodulin-binding motif 880 896 IPR000048 GO:0005515
Vivi7g00201 1207 Pfam IQ calmodulin-binding motif 940 954 IPR000048 GO:0005515
Vivi7g00201 1207 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 142 192 IPR004009 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g00201 Vivi-Chr7 11749585 11779002 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g00201 25 1202 Myosins gene family AT5G54280 53.970 0.0 1306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g00201 K10357 - gmx:100802074 1580.84