Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g00193 ATGCAGGACTATCTCGACACCATGTATGCTAACAGAACACAATCAGATGTTAAACCAGTACTCAATTATTCAATACAGACTGGTGAGGAATTTGCTCTTGAATTTATGAGAGACCGGCTAAATCTCAACAAGCCTCTCACTGATTCCAATTCTACAACTAATTCTATGGGCCTCAAAGGCATTGTAGGCAATGGCATCACTCATGCAGGGTTTGGGAATGCCTCAACGCTAGACAAAGGTTCAACACAGTTTAACAGCCAAACTACATGGTTACACGGGTCAATTCAATCAGCACCAAAAACTTCGTTCAATCAAGAGACTGCTCATTTTCGGCAAGCTTCGGATACCTCATCAAGGATGATCAAGTGTCTTTGTAGTTTTGGTGGTAGAATATTACCAAGACCAAGTGATGGAAAACTAAGGTATGTCGGGGGTCAGACACGTATTCTTCGTCTGACAAAAGACATATCTTGGCCCAAGCTTTGGCAGAGAGCATTGTTAATCTACAATCTGGTTCATATACTCAAGTATCAACTTCCCGGGGAAGATCTTGATGCTTTGGTATCTGTATCATCTGATGAGGATTTACAGAATATGATGGAGGAGTATAACCTTATAGAAGATAGAGAACCCCCACAAAAGCTTAGGATTTTTTTGTTCTCAATGACTGATTTAGAAGATGCTCAGTTCGCTCTTAGTAGCATTGGTGATGATTCTGAGTTCCAGTATGTTGTTGCTGTTAATGGTATGGACTTGGGATCAAGAAACACCTCAACCCCACTTGGTGTCAGCATTTCAAACAATGACATACATAAATTTAACAGTAAAACTATCGAAAGGGAGACTAGTAATGTTGCTGCAGAATCTATAGGTGTCAAGAATGCTCCCTTGACTAACAAATCTGACACTCCACTACCTACCCAGTCTTCCCAGCAAGGATTACCAACGTCTATAGGTGTTAGGAATGCTCCGTTGACTAACAAATATGACACTAGATTGGCTACCCAGTCTTCACAGCAAGCATTACCAACATCTATAGGTATCACGAATGCTCCCTTGACTGGCAAATCTGACACTCCATTTGCTACCCAGTCTTCACAGCAAGTATTACCGACAACTTCAAATGCTTGTGAAACTGATCAGCTGACTTATGGTGACCAAATGGCGCAAGCTGGGGAAATTAGTCGTCAATATCCTGTTCACCACCGCGGTCTTCATCCCTCTCATAACCCTGTGGTTGGTGAGACCCCTATTTCTCTAGCTCCTCATCTTTTGAACAATCAACCGGCGATTCTGAATGAAGACCATCCACCTAGTGGTGTACAATTACAAAAATCCGAACCATCTACCTTGCAGGTGAAAACAATATGTGATGATTCAAGCAAACAAGGGAGTGACCATCGCGACGTTCTATCCTTGGAAATCCCATCCCTGTCTCCGTTTCAGCCCATTGATGGTTTCTTGAAAAACAATGGTCCTGTAGCTTCAGCTGCAGTTACCATGCCTGAGGGGCATCTACCTTCGTTCCCTTGCACAAAAAAAGTTCAGCAACAGGATTGTAAAGACGCTTCTTCTACATCTAGCAATTCATTTGCTCCTAATTATGTTGATTCTCACTCCAATGCAATTGATTTGAGTTCTCTTCATCCCCCTCCAGTTCCTAAAAGAGTTTACTATTCAGAAAGAACTCCGAGGGAGCAAGTAGAGGTCCTGAATCGGTCCTCAAAGTCAGATGATACACACAGCTCGCAATTTCATGTGTCTGATTTGCTTTCTGATACCAAGCCAGAGGATCCATTAACAGAATCTGGTCACAACTTACATGATGGTAATCTGTTAGATCCAGATGACAAATCAAATATTTCAGCAAAGACCTTTCCTGAAGATGACCATACCATTGACAATGGGTTTCCCAGCCATCAAATGAATAAACCGTTGCTTGATACAAACAGTGAGATAAAGTCTAACCTGTCTGAGCACATGGATCCCGAGTTGAAGCAAGTCTTGCTGAGTAATGAAGGAATTAAAGACGTGGAAACTAAAGATAATCATATCAATCCCTTGTTTGATGAAGCTGAAACTAAATATGGTAAATCAGATCTACCCGCTGTTCACCATGTTTCTTCTGTTGAGCGCCTTGATGTTATTGCATCCAATCTTCCAGAGATTGATTGGGGTGAGGCATATGGGAAGGAATCTAATGATAACCCTGTGGTGCAAGAACTACCTACTTCTTTAGCTGGGAACATAACCAAAGGTGTTTCTCAAGATTTCCCCCCTCCTAATGTTTCCAAGCAAATACCAGGGGACATTCTAATTGATATCGATGATCGATTCCCCCGTGAATTGCTTTCTGATATGTACTCTAAAGCAATACTTGAAGAAGACCCCTCCAATCTGCATCCATTTTCCACAGATGGAGTAGGCTATAGTGTAAATATGGAAAATCACGAACCTAAAAGTTGGTCATATTTTGGAAAGCTGGCACAAGGGCTTGACAATGTTTCTCTTATTGATCAAGATCATCTTGGTTTTTCACATCATGTTACACCTCTAACAACTGATAGAGTTCCTCTAGACCGTGAGGATTCCAACCTCAATTTTGGTGAAGAAAATCAGGACTTACATAGAAGGATTGGAACAGAAACCCATGCTCTGAAGTCCAACTATAATCAATCCCAACTTACTGACACCAAAAGTGTGCAGTTTGAATATGAGGATGACAAGTTTGAAACCAAAAACTGCAATTTATCTCCACTTGATCCTTCTTCAGGAGATTTTGATATCAGTTCTGTGCAGGTCATTAAGAATGAAGATCTTGAAGAGTTAAAGGAACTGGGTTCTGGTACATTTGGGACTGTTTATCATGGAAAATGGAGAGGAACAGATGTTGCTATCAAGAGAATAAAGAAGAGTTGCTTCACTGGTCGATCATCTGAGCAAGAGAGACTGACTACAGAGTTCTGGCAAGAAGCTGACATTCTTTCAAAGCTTCATCATCCAAATGTGGTTGCATTTTACGGTGTGGTACAGGATGGACCAGGAGGAACGATGGCTACTGTTACAGAATTCATGGTGGATGGTTCTCTTAGGCATGTATTACTTCGAAAGGATAGGCATCTTGATCGTCGCAAAAGGCTGATAATTGCAATGGATGCAGCTTTTGGAATGGAATATTTACACTCAAAAAACATTGTGCATTTCGACTTAAAATGTGACAATTTGCTTGTAAACTTGAAAGATCCTTTGCGGCCAATATGCAAGGTTGGTGATTTTGGCTTGTCAAAAATTAAGCGAAATACCTTGGTTACTGGTGGTGTGCGGGGCACTCTACCTTGGATGGCACCAGAGCTGCTGAATGGAAGCAGCAGCAAGGTCTCAGAAAAGGTTGACGTGTTCTCCTTTGGTATAGTGTTATGGGAAATTTTAACTGGTGAGGAGCCATATGCCAATATGCACTATGGTGCAATTATAGGTGGGATTGTAAATAACACATTGAGGCCAACCATTCCAAGCCACTGTGATCTCGAATGGAGAACATTGATGGAACAATGTTGGACGCCAAATCCTGTGGTCAGGCCTTCCTTCACAGAAATTGCAAGTCGGTTGCGCATAATGTCCGCAGCCGCACAGGGAAACAAACCATCTAAATGA 3654 0.4171 MQDYLDTMYANRTQSDVKPVLNYSIQTGEEFALEFMRDRLNLNKPLTDSNSTTNSMGLKGIVGNGITHAGFGNASTLDKGSTQFNSQTTWLHGSIQSAPKTSFNQETAHFRQASDTSSRMIKCLCSFGGRILPRPSDGKLRYVGGQTRILRLTKDISWPKLWQRALLIYNLVHILKYQLPGEDLDALVSVSSDEDLQNMMEEYNLIEDREPPQKLRIFLFSMTDLEDAQFALSSIGDDSEFQYVVAVNGMDLGSRNTSTPLGVSISNNDIHKFNSKTIERETSNVAAESIGVKNAPLTNKSDTPLPTQSSQQGLPTSIGVRNAPLTNKYDTRLATQSSQQALPTSIGITNAPLTGKSDTPFATQSSQQVLPTTSNACETDQLTYGDQMAQAGEISRQYPVHHRGLHPSHNPVVGETPISLAPHLLNNQPAILNEDHPPSGVQLQKSEPSTLQVKTICDDSSKQGSDHRDVLSLEIPSLSPFQPIDGFLKNNGPVASAAVTMPEGHLPSFPCTKKVQQQDCKDASSTSSNSFAPNYVDSHSNAIDLSSLHPPPVPKRVYYSERTPREQVEVLNRSSKSDDTHSSQFHVSDLLSDTKPEDPLTESGHNLHDGNLLDPDDKSNISAKTFPEDDHTIDNGFPSHQMNKPLLDTNSEIKSNLSEHMDPELKQVLLSNEGIKDVETKDNHINPLFDEAETKYGKSDLPAVHHVSSVERLDVIASNLPEIDWGEAYGKESNDNPVVQELPTSLAGNITKGVSQDFPPPNVSKQIPGDILIDIDDRFPRELLSDMYSKAILEEDPSNLHPFSTDGVGYSVNMENHEPKSWSYFGKLAQGLDNVSLIDQDHLGFSHHVTPLTTDRVPLDREDSNLNFGEENQDLHRRIGTETHALKSNYNQSQLTDTKSVQFEYEDDKFETKNCNLSPLDPSSGDFDISSVQVIKNEDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTTEFWQEADILSKLHHPNVVAFYGVVQDGPGGTMATVTEFMVDGSLRHVLLRKDRHLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPLRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPTIPSHCDLEWRTLMEQCWTPNPVVRPSFTEIASRLRIMSAAAQGNKPSK 1217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g00193 1217 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1028 1217 - -
Vivi7g00193 1217 MobiDBLite consensus disorder prediction 293 322 - -
Vivi7g00193 1217 CDD STKc_MAP3K-like 946 1203 - -
Vivi7g00193 1217 PRINTS Tyrosine kinase catalytic domain signature 1174 1196 IPR001245 GO:0004672|GO:0006468
Vivi7g00193 1217 PRINTS Tyrosine kinase catalytic domain signature 1130 1152 IPR001245 GO:0004672|GO:0006468
Vivi7g00193 1217 PRINTS Tyrosine kinase catalytic domain signature 1059 1077 IPR001245 GO:0004672|GO:0006468
Vivi7g00193 1217 PRINTS Tyrosine kinase catalytic domain signature 1022 1035 IPR001245 GO:0004672|GO:0006468
Vivi7g00193 1217 PANTHER SERINE-THREONINE PROTEIN KINASE 165 1204 - -
Vivi7g00193 1217 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 933 1027 - -
Vivi7g00193 1217 SMART serkin_6 940 1206 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g00193 1217 SMART PB1_new 135 222 IPR000270 GO:0005515
Vivi7g00193 1217 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 140 222 - -
Vivi7g00193 1217 CDD PB1_UP2 124 220 - -
Vivi7g00193 1217 MobiDBLite consensus disorder prediction 559 583 - -
Vivi7g00193 1217 Gene3D Phosphorylase Kinase; domain 1 933 1027 - -
Vivi7g00193 1217 Gene3D Transferase(Phosphotransferase) domain 1 1028 1216 - -
Vivi7g00193 1217 MobiDBLite consensus disorder prediction 591 635 - -
Vivi7g00193 1217 ProSiteProfiles Protein kinase domain profile. 940 1205 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g00193 1217 Pfam PB1 domain 137 220 IPR000270 GO:0005515
Vivi7g00193 1217 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1065 1077 IPR008271 GO:0004672|GO:0006468
Vivi7g00193 1217 ProSitePatterns Protein kinases ATP-binding region signature. 946 971 IPR017441 GO:0005524
Vivi7g00193 1217 Pfam Protein tyrosine and serine/threonine kinase 941 1203 IPR001245 GO:0004672|GO:0006468
Vivi7g00193 1217 SUPERFAMILY Protein kinase-like (PK-like) 929 1203 IPR011009 -
Vivi7g00193 1217 SUPERFAMILY CAD & PB1 domains 136 224 - -
Vivi7g00193 1217 MobiDBLite consensus disorder prediction 542 646 - -
Vivi7g00193 1217 Gene3D - 139 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g00193 Vivi-Chr7 11515512 11524097 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g00193 11 1132 MAP Kinase Kinase Kinase AT1G79570 41.074 0.0 743
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Vivi7g00193 PK_Tyr_Ser-Thr 3.3e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g00193 - - psat:127075466 2130.52