Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g00186 ATGGCTAGTGAATTTACTCCTATTCATTTTTTCAAGATTATACTTGCTGAAAGTCTTGAACAAGGAAAGCTTATGATACCAATTAAGTTTGTCAAGAAATATGGACAATGTTTAGCAACAGCTATGTGTATAAGGACTCCCAATGGTTCTGATTGGAAAATAAATTTGGTTAAAAGTGATGGCAAGATATGGTTTGAAAAGGGTTGGAAAGAATTCACAGACTATCATTCTCTATCTCATGGCCATCTTCTAGTTTTCAAATATGAAGGCACTTCTCATTTTGAGGTAAGAATATTTGACAAGAGTGCTTTAGAGATAAACCATCCTTTCAAAAGAGCTGAAGTCAACAAGGAAGAAGATTGTAGAGTAAGTCAAAAGAGAAAAGCTTACTCCTCCTTTGAAATTGGAACCACTAGTTGTGTTAAAAAACACAAAGGAAAACAAGTGAATACAACACTTGAAAGAGCAGAAGAGTTCAAAACATGCAATCCATCATTTGTTGTTGTCATGGGTGCATCTTATGTTGGAAACGGTTTTCTTTTGTCTATACCTTGTATGTTTGGCAAGACTCACTTTGATTTGGACAAGAAGAAAGGGTATATTTGTTTCCAGGTATTAAATTATGAAAAAGTTTGGCTTGCAAAGTACCGAATTAGGATGATCGCGACAGGACTAAAATTTGAACTCACTGGTGGATGGAGGAAATTCTCAAAGGACAATAATTTGAAAGTTGGAGATGTTTGCAAGTTTGAGCTCATTCATAAAACTAATATGACTTTTCAAGTTCACATCTTTAGAGAAGATGAATGA 810 0.3444 MASEFTPIHFFKIILAESLEQGKLMIPIKFVKKYGQCLATAMCIRTPNGSDWKINLVKSDGKIWFEKGWKEFTDYHSLSHGHLLVFKYEGTSHFEVRIFDKSALEINHPFKRAEVNKEEDCRVSQKRKAYSSFEIGTTSCVKKHKGKQVNTTLERAEEFKTCNPSFVVVMGASYVGNGFLLSIPCMFGKTHFDLDKKKGYICFQVLNYEKVWLAKYRIRMIATGLKFELTGGWRKFSKDNNLKVGDVCKFELIHKTNMTFQVHIFREDE 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g00186 269 Gene3D - 3 103 IPR015300 -
Vivi7g00186 269 ProSiteProfiles B3 DNA-binding domain profile. 166 268 IPR003340 GO:0003677
Vivi7g00186 269 Pfam B3 DNA binding domain 11 101 IPR003340 GO:0003677
Vivi7g00186 269 Pfam B3 DNA binding domain 166 267 IPR003340 GO:0003677
Vivi7g00186 269 ProSiteProfiles B3 DNA-binding domain profile. 9 102 IPR003340 GO:0003677
Vivi7g00186 269 CDD B3_DNA 164 266 IPR003340 GO:0003677
Vivi7g00186 269 PANTHER B3 DOMAIN-CONTAINING 6 262 - -
Vivi7g00186 269 SUPERFAMILY DNA-binding pseudobarrel domain 162 266 IPR015300 -
Vivi7g00186 269 SUPERFAMILY DNA-binding pseudobarrel domain 5 102 IPR015300 -
Vivi7g00186 269 CDD B3_DNA 9 100 IPR003340 GO:0003677
Vivi7g00186 269 SMART B3_2 10 102 IPR003340 GO:0003677
Vivi7g00186 269 SMART B3_2 166 268 IPR003340 GO:0003677
Vivi7g00186 269 Gene3D - 122 269 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g00186 Vivi-Chr7 10817797 10818887 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g00186 10 266 B3 DNA Binding Superfamily AT3G18990 28.614 7.47e-37 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Vivi7g00186 B3 8.2e-16 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g00186 - - vvo:131624179 402.134