Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g00171 ATGGCAGAGGAGTTAATATTGCTAGATGAATGGCTCAGTATGTTTGGTATGAGAGCAAGGATAGCATTGGCTGAAAAAGGGATAGAGTATGTGTACAAGGAAGAAGATCTGGACAACAAGAGCCAAATGCTTTTGCAAATGAATCCAATTCACAAGAAGATTCCAGTTCTTATCCATAAGGGAAAACCCGTTTGTGAGTCTATAAACATTGTTGAGTATATTGATCAAGTTTGGAATGATAGTGTTCCATTTCTACCCTCAGATCCTTATCAGAAATCTCAAGCCAGATTTTGGGCTGATTTTATCAACAAGAAGGTTGGTGATGTTGGGGGGAGAATATGGCCTGGAAAGAGAGATGAGATTGAAGTGGCAAAAAAGGAGTTGATTGAAGGGTTAAAGGAGTTGGAGAATATGCTTGGAAACAAACCTTATTTTGGTGGTCACACATTTGGGTTTGTTGACATTGCTTTGATCCCTTTTTACAGTTGGTTTCATACTTATGAGGAGTTATGCAACTTTAAAGTTGAGGCAGAGTGTGATAAGCTGATTGCTTGGGCAAAGAGATGCAAACAAAGGGAGAGTGTTTCCAAATCTATTGCTGATGAAAAAGATGTGTATTATTACGTTGCTAACTATAGGAAGAGGTTTGACTTGGATTGA 660 0.3848 MAEELILLDEWLSMFGMRARIALAEKGIEYVYKEEDLDNKSQMLLQMNPIHKKIPVLIHKGKPVCESINIVEYIDQVWNDSVPFLPSDPYQKSQARFWADFINKKVGDVGGRIWPGKRDEIEVAKKELIEGLKELENMLGNKPYFGGHTFGFVDIALIPFYSWFHTYEELCNFKVEAECDKLIAWAKRCKQRESVSKSIADEKDVYYYVANYRKRFDLD 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g00171 219 SUPERFAMILY GST C-terminal domain-like 77 215 IPR036282 -
Vivi7g00171 219 CDD GST_C_Tau 89 209 IPR045074 GO:0004364|GO:0006749
Vivi7g00171 219 Gene3D - 88 219 - -
Vivi7g00171 219 Pfam Glutathione S-transferase, C-terminal domain 121 188 - -
Vivi7g00171 219 Gene3D Glutaredoxin 1 87 - -
Vivi7g00171 219 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 8 202 IPR045073 -
Vivi7g00171 219 CDD GST_N_Tau 5 78 - -
Vivi7g00171 219 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Vivi7g00171 219 SFLD Main (cytGST) 2 216 - -
Vivi7g00171 219 SUPERFAMILY Thioredoxin-like 6 105 IPR036249 -
Vivi7g00171 219 FunFam Glutathione S-transferase U20 88 219 - -
Vivi7g00171 219 FunFam Tau class glutathione S-transferase 1 87 - -
Vivi7g00171 219 SFLD Main.3: Omega- and Tau-like 2 216 IPR045073 -
Vivi7g00171 219 Coils Coil 118 138 - -
Vivi7g00171 219 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 218 IPR010987 -
Vivi7g00171 219 Pfam Glutathione S-transferase, N-terminal domain 4 76 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g00171 Vivi-Chr7 9483162 9497561 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g00171 1 214 Glutathione S-transferase Gene Family AT1G78370 60.748 4.15e-98 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g00171 K00799 - mnt:21386514 312.768