Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g00165 ATGAATAGTCAAAGAGTTCAAGGGTTTACCTGGAGCGACGCACGAGATTGCAGATTGAGAAGGCCGAAGATGAGTTGTCGATTTGAAGTTCGTGGCCTCTTAATTCTTCTACCGAAAGCTGAAGAAGATTTTTGTGAAAGATTGAAGACCGCAGAGGTTGAAGAAGATGGTGAAATTGAAGGAGATGTTGAACCCGAGGTCGCCGCACAAGGAGTGCCAAAGAAGAGAACATTCAAGAGGTTCAGTTTCAGAGGTGTCGATCTCGACGCTTTCTTGGATATGTCCACTGATGAACTCGTCAAGCTCTTCTCTGCCCGTGCTCGCAGAAGGTTTCAACGTGGTTTGACCCGCAAGCCTATGACACTCATCAAGAAGCTCCGCAAGGCGGGTTTGAGTTTGACCCGAACATTGGCTGTCAGGGTGAACATAGTTTACACTGCCATGAGGGTTCTCACACCCAAAGCAAACACTACCCTGTAG 480 0.4771 MNSQRVQGFTWSDARDCRLRRPKMSCRFEVRGLLILLPKAEEDFCERLKTAEVEEDGEIEGDVEPEVAAQGVPKKRTFKRFSFRGVDLDAFLDMSTDELVKLFSARARRRFQRGLTRKPMTLIKKLRKAGLSLTRTLAVRVNIVYTAMRVLTPKANTTL 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g00165 159 Gene3D 30s Ribosomal Protein S19; Chain A 67 154 IPR023575 GO:0003735|GO:0005840|GO:0006412
Vivi7g00165 159 PANTHER RIBOSOMAL PROTEIN S19P FAMILY MEMBER 68 129 IPR002222 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g00165 Vivi-Chr7 9040385 9045370 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g00165 64 129 Cytoplasmic Ribosomal Protein Gene Family AT5G09500 81.818 1.63e-32 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g00165 K02958 - tpra:123918140 126.716