Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g00163 ATGTCAGAGAGTGGCAGCGGAAGCGGCGGCACAACGGCGGAAATTGTGAGAGATGAACCGTCATCGTCGTGGAGACTGAATGTGAAAGAGTTTAAGTTGCCACGTCACCACCATAATCATCACCATCGTGATGATGATCATGATCATGATCATCAACACCGTCCACGTTCCTTCACTTTCAGTGGCCTTGTTCGTACACCAAAAAAGCAACGCAAGGTTGCAGAATACTACAAACAACAGGAAAGGCTCCTTGAAGGATATAATGACATGGATACCATGACTGAAACCGGACTTTTCCCCGGAAGTCTTACCGAGGATGAAATGAAGCAATTAGCAAAAAGTGAAAGACTAGCAGTTAATTTGTCAAATGCAGTTAACTTGGTGTTATTTGCAGCCAAAGTGTATGCTTCAATTGAGAGCAGGTCATTAGCAGTGATTGCTTCCACTTTGGATTCTCTCTTGGATCTCTTGTCCGGCTTCATATTGTGGTTCACTGCTAATGCCATGAAAACACCAAACCATTATCACTACCCAATTGGAAAGAAAAGAATGCAACCAGTAGGTATCATTGTTTTTGCATCTGTAATGGCAACCTTGGGATTGCAGATTTTGATTGAGTCTGGAAGGCAAATTATTTCCAAGACAAAGCCTGAAATGGATCATAGTGAGTTGATGTGGATGATCGTGATCATGGTATCTGTGACCATTGTAAAGTTCATTTTAATGGTCTACTGTCGAAGGTTTACAAACGAAATTGTTAAAGCCTATGCACAAGATCATTGTTTTGATGTTATTACTAATTCAGTTGGATTAGCTGCTGCTGTGTTGGCTGTCAAGTTCTATTGGTGGATTGATCCATTGGGAGCTATTATTATAGCACTGTACACAATTAATACATGGGTGAAGACAGTGATTGAGAATGTATCATCACTCATTGGAAGGACAGCACCACCTGATTTTCTAGCAAAGTTGACATATCTAATATGGAATCATCATGTAGAAGTTAAACACATAGATACTGTGAGAGCATACACTTTTGGTGCTCATTATTTTGTTGAAGTAGATATTGTGTTGCCAGAAGACATGCCATTAAATCAAGCACACAATATTGGTGAGACACTTCAAGAGAAGCTTGAGCAACTTCCTCAAGTTGAAAGAGCGTTTGTGCACATTGATTTTGAATTTACTCACAGGCCTGAACACAAGATGATGGTGTAA 1218 0.4023 MSESGSGSGGTTAEIVRDEPSSSWRLNVKEFKLPRHHHNHHHRDDDHDHDHQHRPRSFTFSGLVRTPKKQRKVAEYYKQQERLLEGYNDMDTMTETGLFPGSLTEDEMKQLAKSERLAVNLSNAVNLVLFAAKVYASIESRSLAVIASTLDSLLDLLSGFILWFTANAMKTPNHYHYPIGKKRMQPVGIIVFASVMATLGLQILIESGRQIISKTKPEMDHSELMWMIVIMVSVTIVKFILMVYCRRFTNEIVKAYAQDHCFDVITNSVGLAAAVLAVKFYWWIDPLGAIIIALYTINTWVKTVIENVSSLIGRTAPPDFLAKLTYLIWNHHVEVKHIDTVRAYTFGAHYFVEVDIVLPEDMPLNQAHNIGETLQEKLEQLPQVERAFVHIDFEFTHRPEHKMMV 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g00163 405 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 316 392 IPR036837 -
Vivi7g00163 405 FunFam Metal tolerance protein 11 118 311 - -
Vivi7g00163 405 MobiDBLite consensus disorder prediction 34 61 - -
Vivi7g00163 405 Gene3D Cation efflux protein transmembrane domain 117 311 IPR027469 -
Vivi7g00163 405 PANTHER MITOCHONDRIAL METAL TRANSPORTER 1-RELATED 24 402 - -
Vivi7g00163 405 Pfam Cation efflux family 122 312 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Vivi7g00163 405 SUPERFAMILY Cation efflux protein transmembrane domain-like 114 313 IPR027469 -
Vivi7g00163 405 FunFam Metal tolerance protein 11 314 394 - -
Vivi7g00163 405 Pfam Dimerisation domain of Zinc Transporter 318 392 IPR027470 -
Vivi7g00163 405 MobiDBLite consensus disorder prediction 1 21 - -
Vivi7g00163 405 MobiDBLite consensus disorder prediction 41 56 - -
Vivi7g00163 405 NCBIfam cation diffusion facilitator family transporter 121 392 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Vivi7g00163 405 MobiDBLite consensus disorder prediction 1 18 - -
Vivi7g00163 405 Gene3D Cation efflux protein, cytoplasmic domain 316 393 IPR036837 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g00163 Vivi-Chr7 8951012 8953454 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g00163 - - gmx:100811575 641.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g00163 7 8951012 8953454 Vivi7g00163 7 8951012 8953454 ECH