Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g00147 ATGGTTATCATCAAGGGAAAATCGCGAGTCGGTTCAACGCGTCCCTCTGCAGGTGGACAATCACGTCCAACTGCTGGTGCTAAGAATTTCAAGGTTTTTTCTGATAATGATCCGATTAAAGTTGGTGATGGCTCCATAAAGAGTGCTATATCAGTTGACAAAGGCAAGGAGAAAAGTATTGCAACATGTGACACTTCAAATATAAACTCGAGAAAAGCATTGGCTGATGTTAGCAATGATCAAGGAAACTCTACGACAGCTGCTAATCGTAGTAATATCTTCAAGGTTTCAGCAGGTTCAACGACTAAAAAAGTGGGTATCTCTTTGAAGAAATCCTTCACGGTTAAAGAGCAGAAAAATACTAGTCATGGTGGAGTTCAATTAGATGCTCGCAATAGAGGTTCAAGGGTTCCTTTAGGAGACCGGAAGAATAGTTCAAATGGAGGTCACTCTGTTGCCTCAAAGGATAGGAAGTCTCTGCCAGTTTTAGGTACAACAGGCGTAAGGGTTTCTTTAGGTGATCAGAAGAATAGCTTAAATGGAGGTCAATCAGTTGCGACAAACGATAGGTTTGCAAGGAAGCATATGTTACCTACAACTACAAGCACTTCAAGGAAGTCTCTGCCAGTTCCTAGGAGGGTAAACAGGGTAGATATGAATAACACAAAGGAAAATGCTGGAAGTTCTGAAACATCCAATAGCCAAAATGGTCTACCAAGTAAGCTGACAGCAGGCAGAAGGGTTAGTTCGCAACTAATCAATGCAAGGAGCCATATATGGAAGACTCGAGTCAGTGACGGCTTTGTTCAAACGGTTACAAGTCATGCTAACCAAGCAGCCTCAAGGAATTCCACCAAGCCTATTGTTAAGATCACACTCAAGGCTAGTACATCTCAGAGGACTCTAAAATCTAAATCCATATCAGATCAGAACAAATCAAAACCAACTACTGCTGTAGCATCTAAGGATGAGGAAAAGGTTTCTTCTTCACTTCCTAAGGATGAGGAAAACGTTTCTTCGTCTCTTCCTAAGGATGAGGAAAGCGGTTCTTTGTCTCTTCCTGAGAATAGTTCAATGGTCATTTCCGATGGTGCAAATCAAAGACATCAGCCATCTGATGGGGATAGTGGTCTAAGAACAGATTTGTCAGAGTTGATTCCAAGAAAGAGTTCTAGCCGTCGGAAATCTTATACAACTTCACTAATGGAAAAATCTAAGATTCTCAAGGAAAATGGTGAAGTCAAGAAGCAGGATAGCCTACCAAATATAGATGATGAATGTAATCATCTAGAAGTTTCTGAATATATTGATGATATATATCATTACTATTGGGTAACCGAGGCACATAGTCAAGCTCTGTCAAATTACATGTCAATTCAGACAGAGATTACTCCTCATATGCGGGGAGTATTGGTCAACTGGCTAATTGAGGTACACTTCAAATATGATTTGATGCCAGAAACGCTATATCTGACAGTCACATTGTTGGATCAATATCTTTCCCAAGTGCCTTTAAAAAGGAGTGACATGCAGTTAGTTGGTCTTACAGCACTTTTGCTGGCTTCGAAGTATGAAGACTTTTGGCATCCAAGGGTAAAGGATTTGATTAGTATCTCGGCTGAAACGTATACTAGAGATCAAATGCTTGGAATGGAAAAGCTTATTCTTAGAAAATTGAAGTTCCGTCTTAATGCTCCCACTCCTTACGTTTTTATGGTTAGGTTCATCAAGGCTGCACAATCAAATATGAAGCTTGAACACATGGCGTTCTTTCTCATTGACCTGTGCTTAGTTGAATATGAAGCCTTAGCATTCAAGCCTTCGTTACTATGTGCATCAGCTCTGTATCTTGCACGTTGTACCCTGCAAATAACCCCATCATGGACACCACTACTTCAAAAGCATGCACGTTATGATGTTTCACAGATGAGGGATTGTGCTGATATGATGCTGAAATTCCATAAAACTGCTGGGAAGGGAAAGTTAACAGTGGCTTATGAAAAATATTCCAGAGAGGAACTCAGTGCTGTATCAGGAGTGAAACCGTTGGACAGACTTCCTCGTTAA 2067 0.4064 MVIIKGKSRVGSTRPSAGGQSRPTAGAKNFKVFSDNDPIKVGDGSIKSAISVDKGKEKSIATCDTSNINSRKALADVSNDQGNSTTAANRSNIFKVSAGSTTKKVGISLKKSFTVKEQKNTSHGGVQLDARNRGSRVPLGDRKNSSNGGHSVASKDRKSLPVLGTTGVRVSLGDQKNSLNGGQSVATNDRFARKHMLPTTTSTSRKSLPVPRRVNRVDMNNTKENAGSSETSNSQNGLPSKLTAGRRVSSQLINARSHIWKTRVSDGFVQTVTSHANQAASRNSTKPIVKITLKASTSQRTLKSKSISDQNKSKPTTAVASKDEEKVSSSLPKDEENVSSSLPKDEESGSLSLPENSSMVISDGANQRHQPSDGDSGLRTDLSELIPRKSSSRRKSYTTSLMEKSKILKENGEVKKQDSLPNIDDECNHLEVSEYIDDIYHYYWVTEAHSQALSNYMSIQTEITPHMRGVLVNWLIEVHFKYDLMPETLYLTVTLLDQYLSQVPLKRSDMQLVGLTALLLASKYEDFWHPRVKDLISISAETYTRDQMLGMEKLILRKLKFRLNAPTPYVFMVRFIKAAQSNMKLEHMAFFLIDLCLVEYEALAFKPSLLCASALYLARCTLQITPSWTPLLQKHARYDVSQMRDCADMMLKFHKTAGKGKLTVAYEKYSREELSAVSGVKPLDRLPR 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g00147 688 MobiDBLite consensus disorder prediction 297 317 - -
Vivi7g00147 688 CDD CYCLIN_CCNB1-like_rpt1 432 561 - -
Vivi7g00147 688 FunFam putative cyclin-B3-1 isoform X3 562 687 - -
Vivi7g00147 688 MobiDBLite consensus disorder prediction 170 187 - -
Vivi7g00147 688 MobiDBLite consensus disorder prediction 220 243 - -
Vivi7g00147 688 Pfam Cyclin, C-terminal domain 566 678 IPR004367 -
Vivi7g00147 688 CDD CYCLIN_AtCycB-like_rpt2 566 682 - -
Vivi7g00147 688 SMART cyclin_7 473 557 IPR013763 -
Vivi7g00147 688 SMART cyclin_7 570 652 IPR013763 -
Vivi7g00147 688 FunFam Cyclin N-terminal domain containing 2 453 561 - -
Vivi7g00147 688 SMART Cyclin_C_2 566 683 IPR004367 -
Vivi7g00147 688 PANTHER CYCLINS 389 670 IPR039361 -
Vivi7g00147 688 MobiDBLite consensus disorder prediction 297 402 - -
Vivi7g00147 688 MobiDBLite consensus disorder prediction 1 31 - -
Vivi7g00147 688 MobiDBLite consensus disorder prediction 116 243 - -
Vivi7g00147 688 MobiDBLite consensus disorder prediction 318 342 - -
Vivi7g00147 688 MobiDBLite consensus disorder prediction 194 209 - -
Vivi7g00147 688 MobiDBLite consensus disorder prediction 139 153 - -
Vivi7g00147 688 Gene3D - 559 686 - -
Vivi7g00147 688 SUPERFAMILY Cyclin-like 566 684 IPR036915 -
Vivi7g00147 688 Gene3D - 452 558 - -
Vivi7g00147 688 Pfam Cyclin, N-terminal domain 438 564 IPR006671 -
Vivi7g00147 688 MobiDBLite consensus disorder prediction 343 377 - -
Vivi7g00147 688 SUPERFAMILY Cyclin-like 428 564 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g00147 Vivi-Chr7 8703387 8713162 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g00147 28 687 Core Cell Cycle Gene Families AT1G16330 41.547 8.43e-160 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g00147 K21777 - tpra:123899654 836.254