Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g00146 ATGGTTATCATCAAGGGAAAATCGCGAGTCGGTTCAACGCGTCCCTCTGCAGGTGGACAATCACGTCCAACTGCTGGTGCTAAGAATTTCAAGGTTTTTTCTGATAATGATCCGATTAAAGTTGGTGATGGCTCCATAAAGAGTGCTATATCAGTTGACAAAGGCAAGGAGAAAAGTATTGCAACATGTGACACTTCAAATATAAACTCGAGAAAAGCATTGGCTGATGTTAGCAATGATCAAGGAAACTCTACGACAGCTGCTAATCGTAGTAATATCTTCAAGGTTTCAGCAGGTTCAACGACTAAAAAAGTGGGTATCTCTTTGAAGAAATCCTTCACGGTTAAAGAGCAGAAAAATACTAGTCATGGTGGAGTTCAATTAGATGCTCGCAATAGAGGTTCAAGGGTTCCTTTAGGAGACCGGAAGAATAGTTCAAATGGAGGTCACTCTGTTGCCTCAAAGGATAGAACTTCTAGGAAGTCTCTGCCAGTTTTAGGTACAACAGGCGTAAGGGTTTCTTTAGGTGATCAGAAGAATAGCTTAAATGGAGGTCAATCAGTTGCGACAAACGATAGGTTTGCAAGGAAGCATATGTTACCTACAACTACAAGCACTTCAAGGAAGTCTCTGCCAGTTCCTAGGAGGGTAAACAGGGTAGATATGAATAACACAAAGGAAAATGCTGGAAGTTCTGAAACATCCAATAGCCAAAATGGTCTACCAAGTAAGCTGACAGCAGGCAGAAGGGTTAGTTCGCAACTAATCAATGCAAGGAGCCATATATGGAAGACTCGAGTCAGTGACGGCTTTGTTCAAACGGTTACAAGTCATGCTAACCAAGCAGCCTCAAGGAATTCCACCAAGCCTATTGTTAAGATCACACTCAAGGCTAGTACATCTCAGAGGACTCTAAAATCTAAATCCATATCAGATCAGAACAAATCAAAACCAACTACTGCTGTAGCATCTAAGGATGAGGAAAAGGTTTCTTCTTCACTTCCTAAGGATGAGGAAAACGTTTCTTCGTCTCTTCCTAAGGATGAGGAAAGCGGTTCTTTGTCTCTTCCTGAGAATAGTTCAATGGTCATTTCCGATGGTGCAAATCAAAGACATCAGCCATCTGATGGGGATAGTGGTCTAAGAACAGATTTGTCAGAGTTGATTCCAAGAAAGAGTTCTAGCCGTCGGAAATCTTATACAACTTCACTAATGGAAAAATCTAAGATTCTCAAGGAAAATGGTGAAGTCAAGAAGCAGGATAGCCTACCAAATATAGATGATGAATGTAATCATCTAGAAGTTTCTGAATATATTGATGATATATATCATTACTATTGGGTAACCGAGGCACATAGTCAAGCTCTGTCAAATTACATGTCAATTCAGACAGAGATTACTCCTCATATGCGGGGAGTATTGGTCAACTGGCTAATTGAGGTACACTTCAAATATGATTTGATGCCAGAAACGCTATATCTGACAGTCACATTGTTGGATCAATATCTTTCCCAAGTGCCTTTAAAAAGGAGTGACATGCAGTTAGTTGGTCTTACAGCACTTTTGCTGGCTTCGAAGTATGAAGACTTTTGGCATCCAAGGGTAAAGGATTTGATTAGTATCTCGGCTGAAACGTATACTAGAGATCAAATGCTTGGAATGGAAAAGCTTATTCTTAGAAAATTGAAGTTCCGTCTTAATGCTCCCACTCCTTACGTTTTTATGGTTAGGTTCATCAAGGCTGCACAATCAAATATGAAGCTTGAACACATGGCGTTCTTTCTCATTGACCTGTGCTTAGTTGAATATGAAGCCTTAGCATTCAAGCCTTCGTTACTATGTGCATCAGCTCTGTATCTTGCACGTTGTACCCTGCAAATAACCCCATCATGGACACCACTACTTCAAAAGCATGCACGTTATGATGTTTCACAGATGAGGGATTGTGCTGATATGATGCTGAAATTCCATAAAACTGCTGGGAAGGGAAAGTTAACAGTGGCTTATGAAAAATATTCCAGAGAGGAACTCAGTGCTGTATCAGGAGTGAAACCGTTGGACAGACTTCCTCGTTAA 2076 0.4061 MVIIKGKSRVGSTRPSAGGQSRPTAGAKNFKVFSDNDPIKVGDGSIKSAISVDKGKEKSIATCDTSNINSRKALADVSNDQGNSTTAANRSNIFKVSAGSTTKKVGISLKKSFTVKEQKNTSHGGVQLDARNRGSRVPLGDRKNSSNGGHSVASKDRTSRKSLPVLGTTGVRVSLGDQKNSLNGGQSVATNDRFARKHMLPTTTSTSRKSLPVPRRVNRVDMNNTKENAGSSETSNSQNGLPSKLTAGRRVSSQLINARSHIWKTRVSDGFVQTVTSHANQAASRNSTKPIVKITLKASTSQRTLKSKSISDQNKSKPTTAVASKDEEKVSSSLPKDEENVSSSLPKDEESGSLSLPENSSMVISDGANQRHQPSDGDSGLRTDLSELIPRKSSSRRKSYTTSLMEKSKILKENGEVKKQDSLPNIDDECNHLEVSEYIDDIYHYYWVTEAHSQALSNYMSIQTEITPHMRGVLVNWLIEVHFKYDLMPETLYLTVTLLDQYLSQVPLKRSDMQLVGLTALLLASKYEDFWHPRVKDLISISAETYTRDQMLGMEKLILRKLKFRLNAPTPYVFMVRFIKAAQSNMKLEHMAFFLIDLCLVEYEALAFKPSLLCASALYLARCTLQITPSWTPLLQKHARYDVSQMRDCADMMLKFHKTAGKGKLTVAYEKYSREELSAVSGVKPLDRLPR 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g00146 691 Gene3D - 455 561 - -
Vivi7g00146 691 SUPERFAMILY Cyclin-like 431 567 IPR036915 -
Vivi7g00146 691 FunFam putative cyclin-B3-1 isoform X3 565 690 - -
Vivi7g00146 691 Gene3D - 562 689 - -
Vivi7g00146 691 FunFam Cyclin N-terminal domain containing 2 456 564 - -
Vivi7g00146 691 SUPERFAMILY Cyclin-like 569 687 IPR036915 -
Vivi7g00146 691 PANTHER CYCLINS 392 673 IPR039361 -
Vivi7g00146 691 SMART Cyclin_C_2 569 686 IPR004367 -
Vivi7g00146 691 MobiDBLite consensus disorder prediction 300 405 - -
Vivi7g00146 691 MobiDBLite consensus disorder prediction 321 345 - -
Vivi7g00146 691 MobiDBLite consensus disorder prediction 173 190 - -
Vivi7g00146 691 MobiDBLite consensus disorder prediction 223 246 - -
Vivi7g00146 691 MobiDBLite consensus disorder prediction 1 31 - -
Vivi7g00146 691 CDD CYCLIN_AtCycB-like_rpt2 569 685 - -
Vivi7g00146 691 MobiDBLite consensus disorder prediction 346 380 - -
Vivi7g00146 691 MobiDBLite consensus disorder prediction 139 153 - -
Vivi7g00146 691 Pfam Cyclin, C-terminal domain 569 681 IPR004367 -
Vivi7g00146 691 MobiDBLite consensus disorder prediction 300 320 - -
Vivi7g00146 691 SMART cyclin_7 476 560 IPR013763 -
Vivi7g00146 691 SMART cyclin_7 573 655 IPR013763 -
Vivi7g00146 691 Pfam Cyclin, N-terminal domain 441 567 IPR006671 -
Vivi7g00146 691 MobiDBLite consensus disorder prediction 116 246 - -
Vivi7g00146 691 CDD CYCLIN_CCNB1-like_rpt1 435 564 - -
Vivi7g00146 691 MobiDBLite consensus disorder prediction 197 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g00146 Vivi-Chr7 8703387 8713162 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g00146 28 690 Core Cell Cycle Gene Families AT1G16330 41.286 1.30e-160 476
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g00146 K21777 - tpra:123899654 837.025