Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g00144 ATGGTTATCATCAAGGGAAAATCGCGAGTCGGTTCAACGCGTCCCTCTGCAGGTGGACAATCACGTCCAACTGCTGGTGCTAAGAATTTCAAGGTTTTTTCTGATAATGATCCGATTAAAGTTGGTGATGGCTCCATAAAGAGTGCTATATCAGTTGACAAAGGCAAGGAGAAAAGTATTGCAACATGTGACACTTCAAATATAAACTCGAGAAAAGCATTGGCTGATGTTAGCAATGATCAAGGAAACTCTACGACAGCTGCTAATCGTAGTAATATCTTCAAGGTTTCAGCAGGTTCAACGACTAAAAAAGTGGGTATCTCTTTGAAGAAATCCTTCACGGTTAAAGAGCAGAAAAATACTAGTCATGGTGGAGTTCAATTAGATGCTCGCAATAGAGGTTCAAGGGTTCCTTTAGGAGACCGGAAGAATAGTTCAAATGGAGGTCACTCTGTTGCCTCAAAGGATAGGTTTGGAAGGAAGCCTATATTACCTACAACTATAAGAACTTCTAGGAAGTCTCTGCCAGTTTTAGGTACAACAGGCGTAAGGGTTTCTTTAGGTGATCAGAAGAATAGCTTAAATGGAGGTCAATCAGTTGCGACAAACGATAGGTTTGCAAGGAAGCATATGTTACCTACAACTACAAGCACTTCAAGGAAGTCTCTGCCAGTTCCTAGGAGGGTAAACAGGGTAGATATGAATAACACAAAGGAAAATGCTGGAAGTTCTGAAACATCCAATAGCCAAAATGGTCTACCAAGTAAGCTGACAGCAGGCAGAAGGGTTAGTTCGCAACTAATCAATGCAAGGAGCCATATATGGAAGACTCGAGTCAGTGACGGCTTTGTTCAAACGGTTACAAGTCATGCTAACCAAGCAGCCTCAAGGAATTCCACCAAGCCTATTGTTAAGATCACACTCAAGGCTAGTACATCTCAGAGGACTCTAAAATCTAAATCCATATCAGATCAGAACAAATCAAAACCAACTACTGCTGTAGCATCTAAGGATGAGGAAAAGGTTTCTTCTTCACTTCCTAAGGATGAGGAAAACGTTTCTTCGTCTCTTCCTAAGGATGAGGAAAGCGGTTCTTTGTCTCTTCCTGAGAATAGTTCAATGGTCATTTCCGATGGTGCAAATCAAAGACATCAGCCATCTGATGGGGATAGTGGTCTAAGAACAGATTTGTCAGAGTTGATTCCAAGAAAGAGTTCTAGCCGTCGGAAATCTTATACAACTTCACTAATGGAAAAATCTAAGATTCTCAAGGAAAATGGTGAAGTCAAGAAGCAGGATAGCCTACCAAATATAGATGATGAATGTAATCATCTAGAAGTTTCTGAATATATTGATGATATATATCATTACTATTGGGTAACCGAGGCACATAGTCAAGCTCTGTCAAATTACATGTCAATTCAGACAGAGATTACTCCTCATATGCGGGGAGTATTGGTCAACTGGCTAATTGAGGTACACTTCAAATATGATTTGATGCCAGAAACGCTATATCTGACAGTCACATTGTTGGATCAATATCTTTCCCAAGTGCCTTTAAAAAGGAGTGACATGCAGTTAGTTGGTCTTACAGCACTTTTGCTGGCTTCGAAGTATGAAGACTTTTGGCATCCAAGGGTAAAGGATTTGATTAGTATCTCGGCTGAAACGTATACTAGAGATCAAATGCTTGGAATGGAAAAGCTTATTCTTAGAAAATTGAAGTTCCGTCTTAATGCTCCCACTCCTTACGTTTTTATGGTTAGGTTCATCAAGGCTGCACAATCAAATATGAAGCTTGAACACATGGCGTTCTTTCTCATTGACCTGTGCTTAGTTGAATATGAAGCCTTAGCATTCAAGCCTTCGTTACTATGTGCATCAGCTCTGTATCTTGCACGTTGTACCCTGCAAATAACCCCATCATGGACACCACTACTTCAAAAGCATGCACGTTATGATGTTTCACAGATGAGGGATTGTGCTGATATGATGCTGAAATTCCATAAAACTGCTGGGAAGGGAAAGTTAACAGTGGCTTATGAAAAATATTCCAGAGAGGAACTCAGTGCTGTATCAGGAGTGAAACCGTTGGACAGACTTCCTCGTTAA 2112 0.4053 MVIIKGKSRVGSTRPSAGGQSRPTAGAKNFKVFSDNDPIKVGDGSIKSAISVDKGKEKSIATCDTSNINSRKALADVSNDQGNSTTAANRSNIFKVSAGSTTKKVGISLKKSFTVKEQKNTSHGGVQLDARNRGSRVPLGDRKNSSNGGHSVASKDRFGRKPILPTTIRTSRKSLPVLGTTGVRVSLGDQKNSLNGGQSVATNDRFARKHMLPTTTSTSRKSLPVPRRVNRVDMNNTKENAGSSETSNSQNGLPSKLTAGRRVSSQLINARSHIWKTRVSDGFVQTVTSHANQAASRNSTKPIVKITLKASTSQRTLKSKSISDQNKSKPTTAVASKDEEKVSSSLPKDEENVSSSLPKDEESGSLSLPENSSMVISDGANQRHQPSDGDSGLRTDLSELIPRKSSSRRKSYTTSLMEKSKILKENGEVKKQDSLPNIDDECNHLEVSEYIDDIYHYYWVTEAHSQALSNYMSIQTEITPHMRGVLVNWLIEVHFKYDLMPETLYLTVTLLDQYLSQVPLKRSDMQLVGLTALLLASKYEDFWHPRVKDLISISAETYTRDQMLGMEKLILRKLKFRLNAPTPYVFMVRFIKAAQSNMKLEHMAFFLIDLCLVEYEALAFKPSLLCASALYLARCTLQITPSWTPLLQKHARYDVSQMRDCADMMLKFHKTAGKGKLTVAYEKYSREELSAVSGVKPLDRLPR 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g00144 703 MobiDBLite consensus disorder prediction 116 163 - -
Vivi7g00144 703 Pfam Cyclin, C-terminal domain 581 693 IPR004367 -
Vivi7g00144 703 SMART Cyclin_C_2 581 698 IPR004367 -
Vivi7g00144 703 MobiDBLite consensus disorder prediction 312 417 - -
Vivi7g00144 703 FunFam putative cyclin-B3-1 isoform X3 577 702 - -
Vivi7g00144 703 MobiDBLite consensus disorder prediction 333 357 - -
Vivi7g00144 703 MobiDBLite consensus disorder prediction 235 258 - -
Vivi7g00144 703 CDD CYCLIN_AtCycB-like_rpt2 581 697 - -
Vivi7g00144 703 MobiDBLite consensus disorder prediction 1 31 - -
Vivi7g00144 703 Gene3D - 467 573 - -
Vivi7g00144 703 MobiDBLite consensus disorder prediction 212 258 - -
Vivi7g00144 703 PANTHER CYCLINS 404 685 IPR039361 -
Vivi7g00144 703 MobiDBLite consensus disorder prediction 358 392 - -
Vivi7g00144 703 Gene3D - 574 701 - -
Vivi7g00144 703 SUPERFAMILY Cyclin-like 581 699 IPR036915 -
Vivi7g00144 703 MobiDBLite consensus disorder prediction 312 332 - -
Vivi7g00144 703 FunFam Cyclin N-terminal domain containing 2 468 576 - -
Vivi7g00144 703 CDD CYCLIN_CCNB1-like_rpt1 447 576 - -
Vivi7g00144 703 SMART cyclin_7 488 572 IPR013763 -
Vivi7g00144 703 SMART cyclin_7 585 667 IPR013763 -
Vivi7g00144 703 SUPERFAMILY Cyclin-like 443 579 IPR036915 -
Vivi7g00144 703 Pfam Cyclin, N-terminal domain 453 579 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g00144 Vivi-Chr7 8703387 8713162 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g00144 212 702 Core Cell Cycle Gene Families AT1G16330 49.595 3.59e-159 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g00144 K21777 - tpra:123899654 840.491