Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g00143 ATGGTTATCATCAAGGGAAAATCGCGAGTCGGTTCAACGCGTCCCTCTGCAGGTGGACAATCACGTCCAACTGCTGGTGCTAAGAATTTCAAGGTTTTTTCTGATAATGATCCGATTAAAGTTGGTGATGGCTCCATAAAGAGTGCTATATCAGTTGACAAAGGCAAGGAGAAAAGTATTGCAACATGTGACACTTCAAATATAAACTCGAGAAAAGCATTGGCTGATGTTAGCAATGATCAAGGAAACTCTACGACAGCTGCTAATCGTAGTAATATCTTCAAGGTTTCAGCAGGTTCAACGACTAAAAAAGTGGGTATCTCTTTGAAGAAATCCTTCACGGTTAAAGAGCAGAAAAATACTAGTCATGGTGGAGTTCAATTAGATGCTCGCAATAGAGGCATAGGTTCAAGGGTTCCTTTAGGAGACCGGAAGAATAGTTCAAATGGAGGTCACTCTGTTGCCTCAAAGGATAGGAAGTCTCTGCCAGTTTTAGGTACAACAGGCGTAAGGGTTTCTTTAGGTGATCAGAAGAATAGCTTAAATGGAGGTCAATCAGTTGCGACAAACGATAGGTTTGCAAGGAAGCATATGTTACCTACAACTACAAGCACTTCAAGGAAGTCTCTGCCAGTTCCTAGGAGGGTAAACAGGGTAGATATGAATAACACAAAGGAAAATGCTGGAAGTTCTGAAACATCCAATAGCCAAAATGGTCTACCAAGTAAGCTGACAGCAGGCAGAAGGGTTAGTTCGCAACTAATCAATGCAAGGAGCCATATATGGAAGACTCGAGTCAGTGACGGCTTTGTTCAAACGGTTACAAGTCATGCTAACCAAGCAGCCTCAAGGAATTCCACCAAGCCTATTGTTAAGATCACACTCAAGGCTAGTACATCTCAGAGGACTCTAAAATCTAAATCCATATCAGATCAGAACAAATCAAAACCAACTACTGCTGTAGCATCTAAGGATGAGGAAAAGGTTTCTTCTTCACTTCCTAAGGATGAGGAAAACGTTTCTTCGTCTCTTCCTAAGGATGAGGAAAGCGGTTCTTTGTCTCTTCCTGAGAATAGTTCAATGGTCATTTCCGATGGTGCAAATCAAAGACATCAGCCATCTGATGGGGATAGTGGTCTAAGAACAGATTTGTCAGAGTTGATTCCAAGAAAGAGTTCTAGCCGTCGGAAATCTTATACAACTTCACTAATGGAAAAATCTAAGATTCTCAAGGAAAATGGTGAAGTCAAGAAGCAGGATAGCCTACCAAATATAGATGATGAATGTAATCATCTAGAAGTTTCTGAATATATTGATGATATATATCATTACTATTGGGTAACCGAGGCACATAGTCAAGCTCTGTCAAATTACATGTCAATTCAGACAGAGATTACTCCTCATATGCGGGGAGTATTGGTCAACTGGCTAATTGAGGTACACTTCAAATATGATTTGATGCCAGAAACGCTATATCTGACAGTCACATTGTTGGATCAATATCTTTCCCAAGTGCCTTTAAAAAGGAGTGACATGCAGTTAGTTGGTCTTACAGCACTTTTGCTGGCTTCGAAGTATGAAGACTTTTGGCATCCAAGGGTAAAGGATTTGATTAGTATCTCGGCTGAAACGTATACTAGAGATCAAATGCTTGGAATGGAAAAGCTTATTCTTAGAAAATTGAAGTTCCGTCTTAATGCTCCCACTCCTTACGTTTTTATGGTTAGGTTCATCAAGGCTGCACAATCAAATATGAAGCTTGAACACATGGCGTTCTTTCTCATTGACCTGTGCTTAGTTGAATATGAAGCCTTAGCATTCAAGCCTTCGTTACTATGTGCATCAGCTCTGTATCTTGCACGTTGTACCCTGCAAATAACCCCATCATGGACACCACTACTTCAAAAGCATGCACGTTATGATGTTTCACAGATGAGGGATTGTGCTGATATGATGCTGAAATTCCATAAAACTGCTGGGAAGGGAAAGTTAACAGTGGCTTATGAAAAATATTCCAGAGAGGAACTCAGTGCTGTATCAGGAGTGAAACCGTTGGACAGACTTCCTCGTTAA 2073 0.4067 MVIIKGKSRVGSTRPSAGGQSRPTAGAKNFKVFSDNDPIKVGDGSIKSAISVDKGKEKSIATCDTSNINSRKALADVSNDQGNSTTAANRSNIFKVSAGSTTKKVGISLKKSFTVKEQKNTSHGGVQLDARNRGIGSRVPLGDRKNSSNGGHSVASKDRKSLPVLGTTGVRVSLGDQKNSLNGGQSVATNDRFARKHMLPTTTSTSRKSLPVPRRVNRVDMNNTKENAGSSETSNSQNGLPSKLTAGRRVSSQLINARSHIWKTRVSDGFVQTVTSHANQAASRNSTKPIVKITLKASTSQRTLKSKSISDQNKSKPTTAVASKDEEKVSSSLPKDEENVSSSLPKDEESGSLSLPENSSMVISDGANQRHQPSDGDSGLRTDLSELIPRKSSSRRKSYTTSLMEKSKILKENGEVKKQDSLPNIDDECNHLEVSEYIDDIYHYYWVTEAHSQALSNYMSIQTEITPHMRGVLVNWLIEVHFKYDLMPETLYLTVTLLDQYLSQVPLKRSDMQLVGLTALLLASKYEDFWHPRVKDLISISAETYTRDQMLGMEKLILRKLKFRLNAPTPYVFMVRFIKAAQSNMKLEHMAFFLIDLCLVEYEALAFKPSLLCASALYLARCTLQITPSWTPLLQKHARYDVSQMRDCADMMLKFHKTAGKGKLTVAYEKYSREELSAVSGVKPLDRLPR 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g00143 690 FunFam Cyclin N-terminal domain containing 2 455 563 - -
Vivi7g00143 690 MobiDBLite consensus disorder prediction 299 404 - -
Vivi7g00143 690 FunFam putative cyclin-B3-1 isoform X3 564 689 - -
Vivi7g00143 690 Gene3D - 561 688 - -
Vivi7g00143 690 MobiDBLite consensus disorder prediction 320 344 - -
Vivi7g00143 690 MobiDBLite consensus disorder prediction 196 211 - -
Vivi7g00143 690 SMART Cyclin_C_2 568 685 IPR004367 -
Vivi7g00143 690 MobiDBLite consensus disorder prediction 116 245 - -
Vivi7g00143 690 MobiDBLite consensus disorder prediction 345 379 - -
Vivi7g00143 690 MobiDBLite consensus disorder prediction 1 31 - -
Vivi7g00143 690 SMART cyclin_7 572 654 IPR013763 -
Vivi7g00143 690 SMART cyclin_7 475 559 IPR013763 -
Vivi7g00143 690 MobiDBLite consensus disorder prediction 299 319 - -
Vivi7g00143 690 SUPERFAMILY Cyclin-like 430 566 IPR036915 -
Vivi7g00143 690 Pfam Cyclin, C-terminal domain 568 680 IPR004367 -
Vivi7g00143 690 SUPERFAMILY Cyclin-like 568 686 IPR036915 -
Vivi7g00143 690 CDD CYCLIN_CCNB1-like_rpt1 434 563 - -
Vivi7g00143 690 MobiDBLite consensus disorder prediction 222 245 - -
Vivi7g00143 690 MobiDBLite consensus disorder prediction 172 189 - -
Vivi7g00143 690 CDD CYCLIN_AtCycB-like_rpt2 568 684 - -
Vivi7g00143 690 Gene3D - 454 560 - -
Vivi7g00143 690 PANTHER CYCLINS 391 672 IPR039361 -
Vivi7g00143 690 Pfam Cyclin, N-terminal domain 440 566 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g00143 Vivi-Chr7 8703387 8713162 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g00143 199 689 Core Cell Cycle Gene Families AT1G16330 49.595 1.83e-159 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g00143 K21777 - tpra:123899654 836.254