Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g00136 ATGGTTATCATCAAGGGAAAATCGCGAGTCGGTTCAACGCGTCCCTCTGCAGGTGGACAATCACGTCCAACTGCTGGTGCTAAGAATTTCAAGGTTTTTTCTGATAATGATCCGATTAAAGTTGGTGATGGCTCCATAAAGAGTGCTATATCAGTTGACAAAGGCAAGGAGAAAAGTATTGCAACATGTGACACTTCAAATATAAACTCGAGAAAAGCATTGGCTGATGTTAGCAATGATCAAGGAAACTCTACGACAGCTGCTAATCGTAGTAATATCTTCAAGGTTTCAGCAGGTTCAACGACTAAAAAAGTGGGTATCTCTTTGAAGAAATCCTTCACGGTTAAAGAGCAGAAAAATACTAGTCATGGTGGAGTTCAATTAGATGCTCGCAATAGAGTAGGCATAGGTTCAAGGGTTCCTTTAGGAGACCGGAAGAATAGTTCAAATGGAGGTCACTCTGTTGCCTCAAAGGATAGGTTTGGAAGGAAGCCTATATTACCTACAACTATAAGAACTTCTAGGAAGTCTCTGCCAGTTTTAGGTACAACAGGCGTAAGGGTTTCTTTAGGTGATCAGAAGAATAGCTTAAATGGAGGTCAATCAGTTGCGACAAACGATAGGTTTGCAAGGAAGCATATGTTACCTACAACTACAAGCACTTCAAGGAAGTCTCTGCCAGTTCCTAGGAGGGTAAACAGGGTAGATATGAATAACACAAAGGAAAATGCTGGAAGTTCTGAAACATCCAATAGCCAAAATGGTCTACCAAGTAAGCTGACAGCAGGCAGAAGGGTTAGTTCGCAACTAATCAATGCAAGGAGCCATATATGGAAGACTCGAGTCAGTGACGGCTTTGTTCAAACGGTTACAAGTCATGCTAACCAAGCAGCCTCAAGGAATTCCACCAAGCCTATTGTTAAGATCACACTCAAGGCTAGTACATCTCAGAGGACTCTAAAATCTAAATCCATATCAGATCAGAACAAATCAAAACCAACTACTGCTGTAGCATCTAAGGATGAGGAAAAGGTTTCTTCTTCACTTCCTAAGGATGAGGAAAACGTTTCTTCGTCTCTTCCTAAGGATGAGGAAAGCGGTTCTTTGTCTCTTCCTGAGAATAGTTCAATGGTCATTTCCGATGGTGCAAATCAAAGACATCAGCCATCTGATGGGGATAGTGGTCTAAGAACAGATTTGTCAGAGTTGATTCCAAGAAAGAGTTCTAGCCGTCGGAAATCTTATACAACTTCACTAATGGAAAAATCTAAGATTCTCAAGGAAAATGGTGAAGTCAAGAAGCAGGATAGCCTACCAAATATAGATGATGAATGTAATCATCTAGAAGTTTCTGAATATATTGATGATATATATCATTACTATTGGGTAACCGAGGCACATAGTCAAGCTCTGTCAAATTACATGTCAATTCAGACAGAGATTACTCCTCATATGCGGGGAGTATTGGTCAACTGGCTAATTGAGGTACACTTCAAATATGATTTGATGCCAGAAACGCTATATCTGACAGTCACATTGTTGGATCAATATCTTTCCCAAGTGCCTTTAAAAAGGAGTGACATGCAGTTAGTTGGTCTTACAGCACTTTTGCTGGCTTCGAAGTATGAAGACTTTTGGCATCCAAGGGTAAAGGATTTGATTAGTATCTCGGCTGAAACGTATACTAGAGATCAAATGCTTGGAATGGAAAAGCTTATTCTTAGAAAATTGAAGTTCCGTCTTAATGCTCCCACTCCTTACGTTTTTATGGTTAGGTTCATCAAGGCTGCACAATCAAATATGAAGCTTGAACACATGGCGTTCTTTCTCATTGACCTGTGCTTAGTTGAATATGAAGCCTTAGCATTCAAGCCTTCGTTACTATGTGCATCAGCTCTGTATCTTGCACGTTGTACCCTGCAAATAACCCCATCATGGACACCACTACTTCAAAAGCATGCACGTTATGATGTTTCACAGATGAGGGATTGTGCTGATATGATGCTGAAATTCCATAAAACTGCTGGGAAGGGAAAGTTAACAGTGGCTTATGAAAAATATTCCAGAGAGGAACTCAGTGCTGTATCAGGAGTGAAACCGTTGGACAGACTTCCTCGTTAA 2121 0.4055 MVIIKGKSRVGSTRPSAGGQSRPTAGAKNFKVFSDNDPIKVGDGSIKSAISVDKGKEKSIATCDTSNINSRKALADVSNDQGNSTTAANRSNIFKVSAGSTTKKVGISLKKSFTVKEQKNTSHGGVQLDARNRVGIGSRVPLGDRKNSSNGGHSVASKDRFGRKPILPTTIRTSRKSLPVLGTTGVRVSLGDQKNSLNGGQSVATNDRFARKHMLPTTTSTSRKSLPVPRRVNRVDMNNTKENAGSSETSNSQNGLPSKLTAGRRVSSQLINARSHIWKTRVSDGFVQTVTSHANQAASRNSTKPIVKITLKASTSQRTLKSKSISDQNKSKPTTAVASKDEEKVSSSLPKDEENVSSSLPKDEESGSLSLPENSSMVISDGANQRHQPSDGDSGLRTDLSELIPRKSSSRRKSYTTSLMEKSKILKENGEVKKQDSLPNIDDECNHLEVSEYIDDIYHYYWVTEAHSQALSNYMSIQTEITPHMRGVLVNWLIEVHFKYDLMPETLYLTVTLLDQYLSQVPLKRSDMQLVGLTALLLASKYEDFWHPRVKDLISISAETYTRDQMLGMEKLILRKLKFRLNAPTPYVFMVRFIKAAQSNMKLEHMAFFLIDLCLVEYEALAFKPSLLCASALYLARCTLQITPSWTPLLQKHARYDVSQMRDCADMMLKFHKTAGKGKLTVAYEKYSREELSAVSGVKPLDRLPR 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g00136 706 MobiDBLite consensus disorder prediction 315 420 - -
Vivi7g00136 706 Gene3D - 577 704 - -
Vivi7g00136 706 PANTHER CYCLINS 407 688 IPR039361 -
Vivi7g00136 706 MobiDBLite consensus disorder prediction 336 360 - -
Vivi7g00136 706 MobiDBLite consensus disorder prediction 213 261 - -
Vivi7g00136 706 Gene3D - 470 576 - -
Vivi7g00136 706 MobiDBLite consensus disorder prediction 213 227 - -
Vivi7g00136 706 SMART cyclin_7 588 670 IPR013763 -
Vivi7g00136 706 SMART cyclin_7 491 575 IPR013763 -
Vivi7g00136 706 Pfam Cyclin, N-terminal domain 456 582 IPR006671 -
Vivi7g00136 706 MobiDBLite consensus disorder prediction 361 395 - -
Vivi7g00136 706 FunFam putative cyclin-B3-1 isoform X3 580 705 - -
Vivi7g00136 706 Pfam Cyclin, C-terminal domain 584 696 IPR004367 -
Vivi7g00136 706 MobiDBLite consensus disorder prediction 315 335 - -
Vivi7g00136 706 MobiDBLite consensus disorder prediction 1 33 - -
Vivi7g00136 706 CDD CYCLIN_CCNB1-like_rpt1 450 579 - -
Vivi7g00136 706 MobiDBLite consensus disorder prediction 238 261 - -
Vivi7g00136 706 SUPERFAMILY Cyclin-like 446 582 IPR036915 -
Vivi7g00136 706 CDD CYCLIN_AtCycB-like_rpt2 584 700 - -
Vivi7g00136 706 MobiDBLite consensus disorder prediction 117 174 - -
Vivi7g00136 706 SUPERFAMILY Cyclin-like 584 702 IPR036915 -
Vivi7g00136 706 FunFam Cyclin N-terminal domain containing 2 471 579 - -
Vivi7g00136 706 SMART Cyclin_C_2 584 701 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g00136 Vivi-Chr7 8703387 8713162 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g00136 215 705 Core Cell Cycle Gene Families AT1G16330 49.595 2.95e-159 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g00136 K21777 - tpra:123899654 840.491