Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g00126 ATGGAAAGAATGTTCCCATCAAAGAAGCCCTCAACTATGATGAATTCTCTTGACAGAACCATGTGTGTTCAAGGTGATTCTGGCCTTGTCCTCACCACTGATCCAAAGCCACGGCTTCGTTGGACTGTCGAACTCCATGAACGCTTCATCGATGCTGTTGCTCAGCTTGGAGGACCAGATAAAGCCACTCCTAAAACAATCATGAGGGTTATGGGTGTGAAGGGTCTTACACTTTACCACCTCAAGAGCCATCTTCAGAAATTTAGGCTTGGAAAGCAACCCCATAAGGAATTCAATGAACAATCAATTAAGGATGGTATGAGAGTTTCAGCTTTTGAACTGCAACGAAATACTGGAACCTCGTCTTCTATGACTGGCCGCAACATGAATGAGATGCAAATGGAGGTGCACAGAAGATTGCATGAACAATTAGAGGTTCAAAAGCATCTTCAATTGAGGATTGAGGCTCAAGGAAAATACATGCAGAGCATATTAGAGAAAGCTTATCACACACTTGCTGGAGAAAACATGGCAGCTGCAGCTACAAATTTCAAGGGAATAAATGGAACTCAAAGCATCCCTGACATGAAAGATTTTGTATCTCCTCATAATAACTTTCCCCATTTCCAAGACCTTAACATTTGTGGTAGTGATGAGGAACAGTTCGAGAGACCAACGCTTGAAGGATTTATGCCAACTAACAATAATAATGAAAACATGTTTGTTGGGAAGAAAAGGACTAACCCTTTTGATGAAAATGGAAAGAGTCCATTAATTTGGAATAATAATAATAATGATCTTAGGCTTCATGATTTTGGAACAACTTCATCATGCATTAGTCCTCAAGATGTTCCTAATTTCAAAAGTGAGTCATTGGATGGAAGTGATGAAAGTGATCCTATTGGTGAAGCTTATGACACAAAGGTGAGCGAGAAGAAGTTTGGTGCATCTATGAAGCTTGGAATAACAACACCTATGATCAATGCTGTGGCAACTGGGAGAACCTTATCACCATTTGGTTGA 1023 0.4037 MERMFPSKKPSTMMNSLDRTMCVQGDSGLVLTTDPKPRLRWTVELHERFIDAVAQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEFNEQSIKDGMRVSAFELQRNTGTSSSMTGRNMNEMQMEVHRRLHEQLEVQKHLQLRIEAQGKYMQSILEKAYHTLAGENMAAAATNFKGINGTQSIPDMKDFVSPHNNFPHFQDLNICGSDEEQFERPTLEGFMPTNNNNENMFVGKKRTNPFDENGKSPLIWNNNNNDLRLHDFGTTSSCISPQDVPNFKSESLDGSDESDPIGEAYDTKVSEKKFGASMKLGITTPMINAVATGRTLSPFG 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g00126 340 Pfam MYB-CC type transfactor, LHEQLE motif 132 170 IPR025756 -
Vivi7g00126 340 SUPERFAMILY Homeodomain-like 35 91 IPR009057 -
Vivi7g00126 340 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 14 215 IPR044848 GO:0003700
Vivi7g00126 340 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 33 93 IPR017930 -
Vivi7g00126 340 MobiDBLite consensus disorder prediction 290 304 - -
Vivi7g00126 340 NCBIfam myb-like DNA-binding domain, SHAQKYF class 36 91 IPR006447 GO:0003677
Vivi7g00126 340 Gene3D - 35 93 - -
Vivi7g00126 340 Pfam Myb-like DNA-binding domain 39 87 IPR001005 -
Vivi7g00126 340 MobiDBLite consensus disorder prediction 279 304 - -
Vivi7g00126 340 FunFam Myb family transcription factor 35 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g00126 Vivi-Chr7 8044120 8046396 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g00126 4 267 G2-like Transcription Factor Family AT1G79430 62.857 3.32e-111 326
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Vivi7g00126 Myb_DNA-binding 3.3e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g00126 - - gmx:100796268 446.432