Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g00125 ATGGAAAGAATGTTCCCATCAAAGAAGCCCTCAACTATGATGAATTCTCTTGACAGAACCATGTGTGTTCAAGGTGATTCTGGCCTTGTCCTCACCACTGATCCAAAGCCACGGCTTCGTTGGACTGTCGAACTCCATGAACGCTTCATCGATGCTGTTGCTCAGCTTGGAGGACCAGATAAAGCCACTCCTAAAACAATCATGAGGGTTATGGGTGTGAAGGGTCTTACACTTTACCACCTCAAGAGCCATCTTCAGAAATTTAGGCTTGGAAAGCAACCCCATAAGGAATTCAATGAACAATCAATTAAGGATGTTTCAGCTTTTGAACTGCAACGAAATACTGGAACCTCGTCTTCTATGACTGGCCGCAACATGAATGAGATGCAAATGGAGGTGCACAGAAGATTGCATGAACAATTAGAGGTTCAAAAGCATCTTCAATTGAGGATTGAGGCTCAAGGAAAATACATGCAGAGCATATTAGAGAAAGCTTATCACACACTTGCTGGAGAAAACATGGCAGCTGCAGCTACAAATTTCAAGGGAATAAATGGAACTCAAAGCATCCCTGACATGAAAGATTTTGTATCTCCTCATAATAACTTTCCCCATTTCCAAGACCTTAACATTTGTGGTAGTGATGAGGAACAGTTCGAGAGACCAACGCTTGAAGGATTTATGCCAACTAACAATAATAATGAAAACATGTTTGTTGGGAAGAAAAGGACTAACCCTTTTGATGAAAATGGAAAGAGTCCATTAATTTGGAATAATAATAATAATGATCTTAGGCTTCATGATTTTGGAACAACTTCATCATGCATTAGTCCTCAAGATGTTCCTAATTTCAAAAGTGAGTCATTGGATGGAAGTGATGAAAGTGATCCTATTGGTGAAGCTTATGACACAAAGGTGAGCGAGAAGAAGTTTGGTGCATCTATGAAGCTTGGAATAACAACACCTATGATCAATGCTGTGGCAACTGGGAGAACCTTATCACCATTTGGTTGA 1014 0.4034 MERMFPSKKPSTMMNSLDRTMCVQGDSGLVLTTDPKPRLRWTVELHERFIDAVAQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEFNEQSIKDVSAFELQRNTGTSSSMTGRNMNEMQMEVHRRLHEQLEVQKHLQLRIEAQGKYMQSILEKAYHTLAGENMAAAATNFKGINGTQSIPDMKDFVSPHNNFPHFQDLNICGSDEEQFERPTLEGFMPTNNNNENMFVGKKRTNPFDENGKSPLIWNNNNNDLRLHDFGTTSSCISPQDVPNFKSESLDGSDESDPIGEAYDTKVSEKKFGASMKLGITTPMINAVATGRTLSPFG 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g00125 337 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 33 93 IPR017930 -
Vivi7g00125 337 MobiDBLite consensus disorder prediction 276 301 - -
Vivi7g00125 337 Gene3D - 35 93 - -
Vivi7g00125 337 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 14 212 IPR044848 GO:0003700
Vivi7g00125 337 NCBIfam myb-like DNA-binding domain, SHAQKYF class 36 91 IPR006447 GO:0003677
Vivi7g00125 337 Pfam MYB-CC type transfactor, LHEQLE motif 129 167 IPR025756 -
Vivi7g00125 337 Pfam Myb-like DNA-binding domain 39 87 IPR001005 -
Vivi7g00125 337 MobiDBLite consensus disorder prediction 287 301 - -
Vivi7g00125 337 SUPERFAMILY Homeodomain-like 35 91 IPR009057 -
Vivi7g00125 337 FunFam Myb family transcription factor 35 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g00125 Vivi-Chr7 8044118 8046396 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g00125 4 264 G2-like Transcription Factor Family AT1G79430 62.143 7.24e-108 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Vivi7g00125 Myb_DNA-binding 3.2e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g00125 - - gmx:100796268 434.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g00125 7 8044118 8046396 Vivi7g00125 7 8044118 8046396 ECH