LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi7g00113	ATGGTTTTTGACAGTATTGAAGATGCTTGGAAATTTTGGGTTGATTATGGTGGAAAAGTTGGATTTGGAGTGAGGAAACAATATTCACACAAGAACAAAAATGGTATTATTACTTCTTACAAGTTTGTTTGTTGTAAAGAAGGTTTGCGAAAACCAGATAAACGAGATTATAAGACTATAAATCCGAGACCGGAGACTAGGAAAAATTGTCAATCAAGGTTAGGCATAAAGAATATGGATGGAAAATTTATGGTTGTTGATTTTGTGGAGGAGCATAACCATATTTTACATCTACCAGAAACAACTCATATGTTGGCATCTCAAAGAAAAATATCTCAATTTCAAGGCCAACAAATTGATCTAGCAGATGATGCTAGACTACAACAAAGAAAATCATTTGATTTAATGAGTAAGGAAGTGGGAGGTAGAACTAATTTGGGATTTACTCGTCTTGATCAAAAGAATTATCTCCGGAAAAAAAGGGAAACGGGTATGATACACGGGGAAGTTGGTTATTTATTGCAATACTTTCGAAGAAAGTTGGTAGAAAATCCAACCTTTTATCATGCATACCAAATGGATGTTGAAGATCAAATCACTAATGTGTTTTGGGCAGATGCAAGTATGGTGACTGATTATGAGTATTTTGGTGATGTAATTTCTCTTGATTCAACATATTGCACAAATACTTCACATAGGCCACTTGCCGTGTTCTCAGGATTTAACCACCATTGA	735	0.3469	MVFDSIEDAWKFWVDYGGKVGFGVRKQYSHKNKNGIITSYKFVCCKEGLRKPDKRDYKTINPRPETRKNCQSRLGIKNMDGKFMVVDFVEEHNHILHLPETTHMLASQRKISQFQGQQIDLADDARLQQRKSFDLMSKEVGGRTNLGFTRLDQKNYLRKKRETGMIHGEVGYLLQYFRRKLVENPTFYHAYQMDVEDQITNVFWADASMVTDYEYFGDVISLDSTYCTNTSHRPLAVFSGFNHH	244

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi7g00113	244	PANTHER	OS01G0519700 PROTEIN	1	228	-	-
	Vivi7g00113	244	Pfam	FAR1 DNA-binding domain	11	96	IPR004330	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vivi7g00113	Vivi-Chr7	6453952	6454686	Dispersed/Transposed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Vivi7g00113		FAR1	3.1e-20	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi7g00113	-		-	mtr:112419407	407.912