Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g00095 ATGGGAAACTCACTGGCGAAAAAGCGCAAAGCTCAATTTTCCGGACACGATGAATCGAGAATCACATCCACCACCACAAGCAAATCCCTCTCCAAACCACCGCAGTTACCGTCTGAACCACAGCAATCTCATCATGGCTTAGGGAAGCTCTCTGCGAAGAAGAAATATGCTCTGATTCCGGATAACTTTACCTCTCTTCAACAGGTTACAAGTGCCTTGAGGAACGAAGGTTTAGAGTCATCAAATCTCATCCTTGGAATCGATTTTACTAAAAGCAATGAATGGACTGGCAGAATCTCGTTTAATAATCGAAGTCTACATGCTATTGGAGATACACGTAATCCCTATGAGAAAGCGATTTCTATTATTGGAAAGACGTTGGCTCCTTTTGATGACGACAACTTGATTCCTTGTTTTGGATTTGGCGACGCTACAACTCATGATCACGAAGTGTTTAGCTTTCATGCTGATAATTCAGCTTGCCATGGATTTGAGGAAGTTTTGGCTTGCTATCAAAAAATTGTTCCAAACTTGAGCCTTTCAGGACCAACATCATATGCTCCGGTGATTGAGGCTGCAATAGACATGGTTGAGAAAACAAATGGCCAATTCCACGTGTTAGTTATTGTTGCAGATGGCCAGGTTACGAGATATGAAAATAATGGTGATGGAAAATTAAGTCCTCAAGAAGAGAGAACAATAAAAGCAATTGTTGATGCAAGTTCATACCCTCTTTCTATTGTTCTGATTGGAGTTGGTGACGGTCCTTGGGGAGATATGAAGAAGTTTGATGACAAGTTACCTGCACGTGATTTCGACAATTTTCAGTTTGTTAACTTCAATGACATCATGTCTAAGAAAATAAGCTCCTCTGCGAAAGAAGCTGCTTTTGCTCTGGCTGCTCTTATGGAGATACCTTTCCAATATAAAGCAACCCTTGAGCTTGGATTACTTGGTCGTACTACAGGAAGGGCAAATAAAATGGTTCCAAGACCTCCTCCAGCACCTTATTCTCGACATATGCCACCAGATTATTTTCTGAGGAACATGCCAGAATCATCCATGGATGATGAGCGAAACCAAATGATATGTGCTATATGTTTGACCAATAGAAAGGATTTGGCCTTTGGATGTGGTCACATGACTTGCAGAGATTGTGGGTCAAGATTAAGCAATTGTCCGATATGCCGACAGAGGATCACCAATCGCTTAAGGGTGTTTTCTGGATGA 1230 0.4163 MGNSLAKKRKAQFSGHDESRITSTTTSKSLSKPPQLPSEPQQSHHGLGKLSAKKKYALIPDNFTSLQQVTSALRNEGLESSNLILGIDFTKSNEWTGRISFNNRSLHAIGDTRNPYEKAISIIGKTLAPFDDDNLIPCFGFGDATTHDHEVFSFHADNSACHGFEEVLACYQKIVPNLSLSGPTSYAPVIEAAIDMVEKTNGQFHVLVIVADGQVTRYENNGDGKLSPQEERTIKAIVDASSYPLSIVLIGVGDGPWGDMKKFDDKLPARDFDNFQFVNFNDIMSKKISSSAKEAAFALAALMEIPFQYKATLELGLLGRTTGRANKMVPRPPPAPYSRHMPPDYFLRNMPESSMDDERNQMICAICLTNRKDLAFGCGHMTCRDCGSRLSNCPICRQRITNRLRVFSG 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g00095 409 Pfam Zinc finger, C3HC4 type (RING finger) 361 401 - -
Vivi7g00095 409 SUPERFAMILY RING/U-box 356 403 - -
Vivi7g00095 409 PANTHER COPINE FAMILY PROTEIN 1 31 384 - -
Vivi7g00095 409 SMART VWA_4 80 283 IPR002035 -
Vivi7g00095 409 MobiDBLite consensus disorder prediction 1 49 - -
Vivi7g00095 409 Pfam Copine 105 318 IPR010734 -
Vivi7g00095 409 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 349 408 IPR013083 -
Vivi7g00095 409 ProSiteProfiles Zinc finger RING-type profile. 364 397 IPR001841 -
Vivi7g00095 409 SMART ring_2 364 396 IPR001841 -
Vivi7g00095 409 MobiDBLite consensus disorder prediction 17 45 - -
Vivi7g00095 409 SUPERFAMILY vWA-like 81 261 IPR036465 -
Vivi7g00095 409 Gene3D von Willebrand factor, type A domain 111 302 IPR036465 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g00095 Vivi-Chr7 5251050 5256734 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g00095 K16280 - gmx:100795579 612.838
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g00095 7 5251050 5256734 Vivi7g00095 7 5251050 5256734 ECH