LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi7g00093	ATGGTGAAATATAATGTTATTTTATTTTCCCTTGTCTCTATAGTTTTTTCATCAATAAATCTTTTTCTGTGTTGCGCCACTGAAAGTGGTGATGAAAGCAGTAAACTTTATATTGTATACATGGGCGCACTTCCTAATGGAGCAACATATTCTGCAACCTCTCATCATCTCAGCATGTTGGAACAAGCTATTGGTGAGAGTGGCGTTGAAAATCGATTGGTTCAAAGTTATAAGAGAAGTTTCAATGGTTTTTCCGCCATACTCAATGACCAACAAAAGGAAAAACTTCTCGGCATGAAAGGCGTGGTCTCAGTTTTTCCAAACCAAAACTTTCATATACAAACTACAAGATCGTGGAATTTTCTTGGATTTCCTCAATCAATCAAAAGGGATCAAATCATGGAGAGTGATTTGATAATTGGAGTAATAGATAGCGGAATATGGCCAGAGTCTGAAAGTTTCAACGACAAAGGTTTTAGTCCCATTCCAAAAAAGTGGAAGGGAGTTTGTAAAGGAGGTTTTAACTTCACTTGTAACAAGAAAATTATTGGGGCACGGTCTTATGGTAATGGAGGGAAGAATGCAAGAGACGAAGCTGGTCACGGAACCCACACAGCATCAACTGCAAGTGGAAGAGAGGTGCGGGATGTAAGCTTTTATGATCTTGCAAAAGGCACTGCAAGGGGTGGAGTCCCGTCATCAAGGATTGCTGTGTACAAATTATGTGGCGCGGATGGTTCATGTAGTGGTAGTAATATCTTAGCTGCATTTGATGATGCCATTGCTGATGGAGTTGACATCATCACAATATCAATTGGGGGCTCAAATGCCCTTGAATTTCTTAAAGATCCTATTGCCATTGGTTCTTTTCATGCCATGGAGAAGGGAATTCTCACATCGCATTCTGCGGGAAACTCTGGTCCAAGGCCAAGTTCTACGGGAAGTGTAGCACCTTGGTTATTTAGTGTTGTTGCATCTACCATAGATCTTCAATTCATTGATAAGCTCATTCTTGGAAATGGAAATACTATTATTGGTAAGTCAGTCAATGCTTTCCCCTCAAATGGCACAAAAATTCCAATAGCTCACGGTACTTGCTTGTATAACTTTGGCCAAACTGTGGTTAAAGGTAAGATTATTTTCTGTGAATCACCAGTGTATGAAGCATTGGCTTCTAAAAGTGGTGCGTTTGGTGTAGTCACAAATGTTGAAGAGTCTAAAAATGATGTGTCTTATGTCTCTTGGATGCCTTCAATTAACTTGGATTCAAAAGATTATCTTTTTGCTCAATCTTACGCAAAATACACTAAATCCCCTGTGGCTGAAATTTTGAAGAGTGAGATCTTGCATGATACAAATGCTCCTAGAATTGCATCTTTCTCTTCTCGTGGTCCGAATTCAGTTGTTCCAGATATTATGAAACCAGATATAAGTGCCCCCGGCGTGGATATTTTAGCTGCTTTTTCGCCTCTTGCCCCACCCTCTAGGCATGTCAGTGACACTAGAAAGGTCAATTACAACATATTATCTGGAACTTCTATGGCATGTCCCCATATTACTGGAATTGCTGCATATGTGAAATCATTTCATCCAGATTGGTCACCAGCAGCTATTAAATCTGCCATCATGACCACGGCAAAACCAGTGAACGGTACTTATAATGATTTGGCTGGTGAGTTTTCTTATGGATCAGGGAATGCTAATCCACAACTAGCTATTAACCCAGGACTTATTTATAACATTACAAAGGATGATTATGTGCAAATGCTTTGCAATTACGGTTATGATAATGAAAAAATTAAACAGATTAGTGGAGAAAACTCAATTTGTCACAGAGCTTCTAACCTTTCACCGGTAAAAGATCTAAACTATCCTGCACTAGTAATTTTTGTTGCACCTCAGAAACCTTTCAATATCAATTTTCCTAGAAAAGTTACAAATGTTGGCTCTCACAATGCAACCTACAAGGCTATTGTCACCCCAATTCCAAATATCAAGATTACAGTAGAGCCAAATCTTATCTCATTCAAATCAGTACAAGAGACACAATCATTTGTTGTCAATGCTCTTGGGAGAGTAGAGTCAAGTCAAACTGTGTTTTCTTCGTCACTTGTTTGGTCAGATGGCACCCACATTGTCAAGAGCCCAATAATTGTACAAATAACATCCTAA	2172	0.39	MVKYNVILFSLVSIVFSSINLFLCCATESGDESSKLYIVYMGALPNGATYSATSHHLSMLEQAIGESGVENRLVQSYKRSFNGFSAILNDQQKEKLLGMKGVVSVFPNQNFHIQTTRSWNFLGFPQSIKRDQIMESDLIIGVIDSGIWPESESFNDKGFSPIPKKWKGVCKGGFNFTCNKKIIGARSYGNGGKNARDEAGHGTHTASTASGREVRDVSFYDLAKGTARGGVPSSRIAVYKLCGADGSCSGSNILAAFDDAIADGVDIITISIGGSNALEFLKDPIAIGSFHAMEKGILTSHSAGNSGPRPSSTGSVAPWLFSVVASTIDLQFIDKLILGNGNTIIGKSVNAFPSNGTKIPIAHGTCLYNFGQTVVKGKIIFCESPVYEALASKSGAFGVVTNVEESKNDVSYVSWMPSINLDSKDYLFAQSYAKYTKSPVAEILKSEILHDTNAPRIASFSSRGPNSVVPDIMKPDISAPGVDILAAFSPLAPPSRHVSDTRKVNYNILSGTSMACPHITGIAAYVKSFHPDWSPAAIKSAIMTTAKPVNGTYNDLAGEFSYGSGNANPQLAINPGLIYNITKDDYVQMLCNYGYDNEKIKQISGENSICHRASNLSPVKDLNYPALVIFVAPQKPFNINFPRKVTNVGSHNATYKAIVTPIPNIKITVEPNLISFKSVQETQSFVVNALGRVESSQTVFSSSLVWSDGTHIVKSPIIVQITS	723

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi7g00093	723	Gene3D	Peptidase S8 propeptide/proteinase inhibitor I9	23	113	IPR037045	-
	Vivi7g00093	723	ProSitePatterns	Serine proteases, subtilase family, serine active site.	511	521	IPR023828	-
	Vivi7g00093	723	ProSiteProfiles	Serine proteases, subtilase domain profile.	118	573	-	-
	Vivi7g00093	723	Pfam	Fibronectin type-III domain	621	719	IPR041469	-
	Vivi7g00093	723	Gene3D	Peptidase S8/S53 domain	137	586	IPR036852	GO:0004252\|GO:0006508
	Vivi7g00093	723	PRINTS	Subtilisin serine protease family (S8) signature	510	526	IPR015500	-
	Vivi7g00093	723	PRINTS	Subtilisin serine protease family (S8) signature	135	154	IPR015500	-
	Vivi7g00093	723	PRINTS	Subtilisin serine protease family (S8) signature	197	210	IPR015500	-
	Vivi7g00093	723	SUPERFAMILY	Subtilisin-like	116	574	IPR036852	GO:0004252\|GO:0006508
	Vivi7g00093	723	CDD	Peptidases_S8_3	111	546	IPR034197	-
	Vivi7g00093	723	Pfam	Peptidase inhibitor I9	37	113	IPR010259	-
	Vivi7g00093	723	Gene3D	-	590	722	-	-
	Vivi7g00093	723	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	37	719	IPR045051	-
	Vivi7g00093	723	Pfam	Subtilase family	136	564	IPR000209	GO:0006508\|GO:0008236
	Vivi7g00093	723	CDD	PA_subtilisin_like	336	443	-	-
	Vivi7g00093	723	Gene3D	-	329	450	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vivi7g00093	Vivi-Chr7	5055156	5057817	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vivi7g00093	7	722	Subtilisin-like Serine Gene Family	AT3G46840	50.538	0.0	712

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi7g00093	-		-	psat:127076787	1127.08