Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g00084 ATGTGTAGCAACCGACTTAAAATTTTAAGGAAAAGAGTCGCCACCATTTATTTTTATTCTAAAGAAAGAGAATTAAACGGATTACCCTACGGTCAGAGATTTTATGTTCGCGAGTCGGTTAAACAGAGAGAAGTGCAAGAAATATTTGAAATTTGTGATGAAGTGGAAAAAAATGAAGAAACTCAAAAAGATACTGATTGTTTAGAAGTAAATGACACATATGAAAAAGATATTCCTAGTGTTGGTATGGTATTTGCTTCTGAAGATGAAGTTACTGAGTATTATAAGAAATATGCTCGACATATAGGTTTTGGAATTGCTAAAATAAGTTCAAAAAACGGAGATGATGGAAAAAAATATTTTACTTTGGCATGTAGTCGAGCAAGAAAGTATGTGAGTAAATCAAAAAATCCATTGAAGCCCAATCCTATTACAAAAACACAGTGTAAGGCGAGATTGAATGCTTGTATTCATTTAAACGGGACAGTTATAGTTTCAAGTATTGTTATTGAGCATAATCATGAACTAAGTCCAAGCAAAGCACGATATTTTAGATCCAACAAAAATTTGGGGTCTCAGATGAGAAGAAGGTTAGAACTCAATGATCAAGCTGGAATTAATGTAAGCAGAAACTTTCGATCTTTAGTTGTTGAAGCGAATGGGTATGAGAATCTTACATTTGGAGAAAAAGACTGTAGAAACTATATAGACAAAGTAAGACGACTACGACTTGGGACAGGTGATGCAGAAGCAATACAAAAATATTTTGTCAGAAAGCAAAAGCAAAATAATCAATTTTATTACGTAATGGATGTGGATGATGAAAGTCGGTTACGTAATGTGTTTTGGGCTGATGCAAGATGTAGGACTGCATATGAGTATTTTGGCGAAGTCATAACTTTTGATACCACTTACTTAACAAATAAATATGACATGCCTTTTGCTCCTTTTGTTGGAGTAAATCATCATGGTCAATCTATGTTGTTGGGTTGTGCTCTATTGTCTAATGAGGATACTAAAACTTTTACTTGGTTGTTCTCAACATGGTTAGAGTGTATGCACGGTTGTGCTCCAAATTCCATAATTACTGATCAAGATAGAGCAATGAAGAATGCAATTGAGACTGTCTTTCCGAAGGCTCGACACCGATGGTGCTTATGGCATTTAATGAAAAAAATTCCAGAAAAGTTTGGTAGATATTCCAATTATGAGTCAATTAAAACACTTTTGCATGATATTGTATATGACTCTACAAGCAAAAGTGATTTTATGATGAGGTGGAAACATATGGTTGTGTATTATGAACTACACGATAATGAATGGCTGAAAGCGTTATTTGAAGAGCGGCATCGGTGGGTTCCTATATATGTTAGGGACACATTTTGGCCTGGAATGTCAACTACACAACGAAGTGAAAGTATGAACTCATTTTTTGATGGATATGTAAACTCAAAGACAACATTGAAGCAATTTGTTGAACAATACGATAATGCATTGAAAGATAAAATTGAAAAGGAGAGCATGGCTGATTTCAGGTCATTTAATACAATTATTGCTTGTGTAAGTCACTTTGGCTTTGAGGTCCAATTTCAAAAAGCATTTACCAATGCAAAGTTCAAAGAATTTCAATTCGAAATTGCTTCGATGATGTATTGCCATGCATGTTTTGATAAATTGGAGGGAATAGATTCCATATTTTGCGTTACAGAGAGTAGGAAAGTGCACGACAAGATGAAAGACATTGGGTTCATGGTATTCTTCAATGAAAAAGATTTCTTGTTTAAATACACATGTTGCTTGTTTGAATTTAAAGGTATTGTATGCAAGCACATCCTTTGTGTGCTTAAGCTCCGAGGAAAAACAGATTCAATCCCTGACAATTATATTTTGGGACGATGGAGGAAGGATGTAAATCACAGACATACACTTATTAAATGTGGTTTAGATAATATGTCTAAAAAATCTGAATTGCAGCGTGTTGATAAAGCTTGTGATGCCTTTTATGAAGTTGCTTCAACAAAGATAAATAGTGAAGATGATTTATTGAAAGTGATGAATTGGATTAAAGAATTGAAAATTGAGCTAGCGTGTAAAGAATCATCTCCTAGAACTGTAGAAGAAGATACTCCAACTCAAAACCAGACTTTTATTCTTGATCCAACAGTGACTCGAAGTAAAGGGCGCCCTCCTTTAAAAAGAAAAACTTCTAAAGTTGATCAAATTGTGAAGAAGAAGCTTGCACCAAAAAAAACTAAAAAATGCAGCCAAAAAAATAAAGATCAAGAAGAGGGCATATCCACATCCAGAATACATGATAAAGAACCTGAAGTATTTTTCACATCTCAACTTGGTGATGGAATTGGAACACAGGAAAGCATTCAAGGAAATACTGAGTATACAAAATGGATGAATAGTTACAGTACTATGACTAATTTAGCTCCTATTTGTCTAAATCAAAAACATCTTGATGAAATAAATCAGGTTTCATACCATTCTAAAAAAAATGGACCATATTTTGAACTTTCACAGGTACAACATCAAATGAATGAAGAACCATCATTGTAG 2565 0.3384 MCSNRLKILRKRVATIYFYSKERELNGLPYGQRFYVRESVKQREVQEIFEICDEVEKNEETQKDTDCLEVNDTYEKDIPSVGMVFASEDEVTEYYKKYARHIGFGIAKISSKNGDDGKKYFTLACSRARKYVSKSKNPLKPNPITKTQCKARLNACIHLNGTVIVSSIVIEHNHELSPSKARYFRSNKNLGSQMRRRLELNDQAGINVSRNFRSLVVEANGYENLTFGEKDCRNYIDKVRRLRLGTGDAEAIQKYFVRKQKQNNQFYYVMDVDDESRLRNVFWADARCRTAYEYFGEVITFDTTYLTNKYDMPFAPFVGVNHHGQSMLLGCALLSNEDTKTFTWLFSTWLECMHGCAPNSIITDQDRAMKNAIETVFPKARHRWCLWHLMKKIPEKFGRYSNYESIKTLLHDIVYDSTSKSDFMMRWKHMVVYYELHDNEWLKALFEERHRWVPIYVRDTFWPGMSTTQRSESMNSFFDGYVNSKTTLKQFVEQYDNALKDKIEKESMADFRSFNTIIACVSHFGFEVQFQKAFTNAKFKEFQFEIASMMYCHACFDKLEGIDSIFCVTESRKVHDKMKDIGFMVFFNEKDFLFKYTCCLFEFKGIVCKHILCVLKLRGKTDSIPDNYILGRWRKDVNHRHTLIKCGLDNMSKKSELQRVDKACDAFYEVASTKINSEDDLLKVMNWIKELKIELACKESSPRTVEEDTPTQNQTFILDPTVTRSKGRPPLKRKTSKVDQIVKKKLAPKKTKKCSQKNKDQEEGISTSRIHDKEPEVFFTSQLGDGIGTQESIQGNTEYTKWMNSYSTMTNLAPICLNQKHLDEINQVSYHSKKNGPYFELSQVQHQMNEEPSL 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g00084 854 MobiDBLite consensus disorder prediction 702 772 - -
Vivi7g00084 854 Pfam MULE transposase domain 298 392 IPR018289 -
Vivi7g00084 854 Pfam FAR1 DNA-binding domain 93 177 IPR004330 -
Vivi7g00084 854 MobiDBLite consensus disorder prediction 753 772 - -
Vivi7g00084 854 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 76 688 IPR031052 GO:0006355
Vivi7g00084 854 MobiDBLite consensus disorder prediction 706 721 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g00084 Vivi-Chr7 4255483 4259412 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vivi7g00084 MULE 2.3e-36 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g00084 - - vvo:131617032 1758.42