Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g00071 ATGATGGCGTCAAAGCCTATCAACATTCCTCATAGGAGTACCAATAGTTTATCAGAAAAATCTCACAAGACAGATCCAAGTTGTGCAAATGATCACACAGAAAATGATGATACCAGAAAGGTGAATAACCAAGAAGCAATTGAAAACAATGAAAAGAAAACTACAAGTAAAGATTCATCATCGTCATCATCATCATTTTCACCATCTATGCCTCAAAAGTTAGAAACACTAATGAGAAACTTGTCTGAATTTTCCACTTCTCCAAGACAAAATCCAAGAAGAATGGTTTCAAAGAGTGCAGCAAGTTCACGTAGTGATAGTTTAGATAGCACAAGTAGTTCACATAATAAGCCACACACAGGAGGCGATGTGAGATGGGATGCAATCAACATGGTTTCAAAAGGGTCAAATTGTAGTCTCAACTTCAGTCACTTTAGGCTTGTGAAACGTGTTGGTTATGGTGACATTGGAAGTGTTTATCTTGTTGAGCTTAAAGGAACAGGAACATTCTACGCCATGAAAGTTATGGATAAGGCTTCCCTTGCTAGCAGAAACAAGCTTCTTAGGGCACAGACTGAGAGGGAGATTCTTGGACTTCTTGATCATCCTTTCTTACCAACCTTGTATTCTTATTTTGAAAATGAAAAGTATTACAGTTTGGTTATGGAGTTTTGTAGTTGTGGTAGTTTGCATTCACTCAGATTGAAGCAACCCAATAGGCATTTCACTGAAGAGGCTGCAAGGTTTTATTGTTCAGAGATTCTATTAGCACTGGAGTATCTCCACATGTTAGGAATAGTATACAGAGATTTAAAACCAGAAAACGTTCTAGTCCGGGACGAAGGCCACATAATGCTATCCGATTTCGACTTATCCCTCCGTTGTTCTGTTAACCCTACGCTCGTAAAATCCTCCTCCGCACACGTAACCACCACATCCATGGGAATCCTAGATGACGAAAACGTTGTCCAGGGTTGCATGCAGCCATCAAGTTTCTTCTTCCCGCGGATCCTCCCCTACAAGAAAAACAGAAAATCAAAATCAGATTTCGGTCTCATAGGCGGCCGTCTTCCAGAACTAATGGCCGAACCAACGAATGTCCGATCAATGTCGTTCGTTGGTACTCACGAGTATCTCGCCCCGGAGATCGTCCGCGGTGAAGGACACGGAAGTGCAGTTGATTGGTGGACATTTGGGATATTTTTATACGAGCTTATATACGGAACAACACCGTTTAAAGGTAATGGAAACCGTGCTACACTTTTTAACGTTGTTGGACAGCCATTAAGGTTTCCTGAACATCCTTCAGCTAGTCCAGTTGCACGAGATCTTATTAGAGGGTTGTTGGTGAAAGAACCTCATAAGAGAATTGCTTATAAAAGAGGTGCAACTGAGATTAAACAACATCCATTTTTTGAAGGGGTTAATTGGGCTTTGATTCGCAGTTCTAGTCCTCCTATTATACCTGACACGTTTGATTTTAGTCAGTATCTTAGTAAAGAAGCTGTTGTTGTGGCAGCTGCTGTTGATAAGAAGGTTGTTGATAAAAATGATGATAGTAAGATGAAGCATGATTCTTCTTACGAAGATTTTGAGTATTTTTAG 1605 0.4031 MMASKPINIPHRSTNSLSEKSHKTDPSCANDHTENDDTRKVNNQEAIENNEKKTTSKDSSSSSSSFSPSMPQKLETLMRNLSEFSTSPRQNPRRMVSKSAASSRSDSLDSTSSSHNKPHTGGDVRWDAINMVSKGSNCSLNFSHFRLVKRVGYGDIGSVYLVELKGTGTFYAMKVMDKASLASRNKLLRAQTEREILGLLDHPFLPTLYSYFENEKYYSLVMEFCSCGSLHSLRLKQPNRHFTEEAARFYCSEILLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVNPTLVKSSSAHVTTTSMGILDDENVVQGCMQPSSFFFPRILPYKKNRKSKSDFGLIGGRLPELMAEPTNVRSMSFVGTHEYLAPEIVRGEGHGSAVDWWTFGIFLYELIYGTTPFKGNGNRATLFNVVGQPLRFPEHPSASPVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFEGVNWALIRSSSPPIIPDTFDFSQYLSKEAVVVAAAVDKKVVDKNDDSKMKHDSSYEDFEYF 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g00071 534 Pfam Protein kinase domain 366 472 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g00071 534 Pfam Protein kinase domain 146 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g00071 534 PANTHER FLIPPASE KINASE 1-RELATED 34 497 - -
Vivi7g00071 534 Gene3D Phosphorylase Kinase; domain 1 143 228 - -
Vivi7g00071 534 ProSiteProfiles Protein kinase domain profile. 145 472 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g00071 534 MobiDBLite consensus disorder prediction 1 71 - -
Vivi7g00071 534 SUPERFAMILY Protein kinase-like (PK-like) 130 493 IPR011009 -
Vivi7g00071 534 MobiDBLite consensus disorder prediction 83 124 - -
Vivi7g00071 534 MobiDBLite consensus disorder prediction 83 119 - -
Vivi7g00071 534 Gene3D Transferase(Phosphotransferase) domain 1 366 490 - -
Vivi7g00071 534 FunFam serine/threonine-protein kinase D6PK-like 229 296 - -
Vivi7g00071 534 MobiDBLite consensus disorder prediction 56 71 - -
Vivi7g00071 534 Gene3D Transferase(Phosphotransferase) domain 1 229 299 - -
Vivi7g00071 534 MobiDBLite consensus disorder prediction 16 55 - -
Vivi7g00071 534 FunFam Serine/Threonine Kinase 143 229 - -
Vivi7g00071 534 SMART serkin_6 145 472 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g00071 534 CDD STKc_phototropin_like 143 490 - -
Vivi7g00071 534 ProSitePatterns Serine/Threonine protein kinases active-site signature. 266 278 IPR008271 GO:0004672|GO:0006468
Vivi7g00071 534 FunFam Serine/threonine-protein kinase AGC1-7 365 490 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g00071 Vivi-Chr7 3769811 3772250 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g00071 71 534 AGC Kinase Gene Family AT1G79250 63.743 0.0 633
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Vivi7g00071 Pkinase 7.7e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g00071 - - vvo:131616903 1021.92