Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g00051 ATGGAATCAGAGTTTGTGGCTCTTGCATCTGCTGGACAAGAAGTAGAATGGTTGAGGGATCTCTTATTAGAGGTTCCATTAGCTAAAGACAATGTTTCAAAAGTATTGATACATTGTGATAGTCAAGCAACCCTGGCTAGAGCATTCAGTGAAGTATACAATGGAAAGTCTAGACACATAGGTCTTAAACACTCTCTCATTATGGAGGAGAGTGGTGGTGATTTTCCTGCTGCTCAAGATTTGGTAGTGGACCACGTCCACGTCGACAAGGGCAAAAGGGCTTCTGAGGAGTTTAAAGTGGGTCGATTTTATAAAATTGATCATTCCAAACTTCCACTGAATTGCCCTGCTCAAATAAAATGTGTGAGCATTGTAATGGTCTGTGACAAAGGGGAGCAACAAGTATCTCTGAGGTATCCAAGCCTCCACTCTCTTAGCACTCATTTCAACGACCAAAGCTTTGGAAAGCCAGGCGGGAAGAAAATCCCCACACTTGACGACAAGTACGTGATGGGAATGGAATTCGCCATCAAAACACTTTGCAGAAGCATCTCAGCTGAGGAATTTGCTCAGAAAAGAAACTCATGGAGCTTCTGGGCCTCTCCCTCTGAAGAAAGCTTTCTAAACCATAACAGTCCAGTTATCAATGATGCTGCTTCTAGTTTGGTTTCCAAGCAGGGTCCATGTTGGTCTCAGCTCAAGTTCACGGGTATGGTGCAGTGGGGCCAACGCAGGCAAGTTTGCTTTCTCGGCCGCCATGAGGAACAAAAGGTTGAATCTTTACACCAACTTCATAAGGAAAAAAGGGAAAGGACTTATAAGAAGAGAAAGAACGTTGAAGAAGAAATGGAGGATGTAAAGCTAGCTCCTTTTGGGGTACTGAGGATGACTCGTCAGAGCTTCAAAAATCAACAAGATATGACTAGTAGCAGTGGGGCTAAAAAGTCTAAGAAAGCAGTAAGCGACACTAAGCAGCAGCAACTCGTTGTTTATAGCAAAAAAGGGCGGAAAGTATCAATTGACAGATGGTCTGCTGAGAGGTATAAGATGGCAGAGGAGAATATGTTGAAGGTTATGAAGGAAAGGGAAGCTGTGTATGGAAATCCAATAATGAGGCAAGACTTGAGATCAGAAGCACGAAAGTATATTGGTGACACAGGTTTACTTGATCATTTGCTGAAGCACATGGCTGGGAAAGTGGTACCAGGAGGAGTTGAAAGATTCCGACGACGTCACAATGCTGAAGGTTCAATGGAATACTGGTTAGAGAGTGCGGATCTCGTTGATATCAGAAAAGAAATGGGTGTACAAGATCCTTACTGGACTCCTCCACCTGGATGGAAGCCTGGAGACAGCATTTCACCAGAACATGTTACTAGAAATGAACTCAGGGAGATAAGGGAGGAAATAATCAAGTTGAAACGAGATATGCTGGATCTCAAATCAAAAAAAGAAGAGGAAGCCTTGGCTATTGTGGTTACTTCTAGTCCTTGTTTGTCAAGTGTGAACTATAGGGACTATGATTCCCAGGTCTCTAAGCAGGAGATTTATGCTGAGCTGGTTCATAAAAAGGCTAGAGTTGAAGAACAGCTAAAAGAAATTACTCTAACTTTGAATGACATGGAGGGCCAACTTGGAATGCTGAAGCCCACAATGTCAGAATCATTAACACCACCAGCGTTATTGCTAGGACCAACATCATCATTGACAGAAAACATTGGAGAGGTGACAAGGGAGGTTGAAGAAGGTACTAATGACAAAGGAACAAAATCAGCGGACACACAAATGGTACGAGGCAGCGCAGCAGAGCACAAGGCAGCAAAGATAGAAAGACTGAAAAGTGGTTTTAAAATCTGCAAACCAAGAGGGACCTTTATGTGGCCAAATATGAGTGTGTCTCCTCATGTTGTGGCTAACCTTGATGAACTCACTGTTGTCCCAACCCCAACCTCAGTTTCCTCTTCTGCCACATCAGCTCCCAAGCTTGTCTCCAATACCAAGACTGGGAAATTGCCACTTTCCCCTTCTTCTCCTGTTAAGCCACTAGCAGAGAGGCGCCCTGTGAGCACAACTACTTTGTCACATGTCACTGGACCCTTTTCCCCTCATCTTTCTCCTCCATTAGAGACCTCAAAATCCACAATCACCAAGAAGGATTCTTCTATTAATCTCAATGAGACTCCTCTGGCCCAAGAGTAG 2199 0.4379 MESEFVALASAGQEVEWLRDLLLEVPLAKDNVSKVLIHCDSQATLARAFSEVYNGKSRHIGLKHSLIMEESGGDFPAAQDLVVDHVHVDKGKRASEEFKVGRFYKIDHSKLPLNCPAQIKCVSIVMVCDKGEQQVSLRYPSLHSLSTHFNDQSFGKPGGKKIPTLDDKYVMGMEFAIKTLCRSISAEEFAQKRNSWSFWASPSEESFLNHNSPVINDAASSLVSKQGPCWSQLKFTGMVQWGQRRQVCFLGRHEEQKVESLHQLHKEKRERTYKKRKNVEEEMEDVKLAPFGVLRMTRQSFKNQQDMTSSSGAKKSKKAVSDTKQQQLVVYSKKGRKVSIDRWSAERYKMAEENMLKVMKEREAVYGNPIMRQDLRSEARKYIGDTGLLDHLLKHMAGKVVPGGVERFRRRHNAEGSMEYWLESADLVDIRKEMGVQDPYWTPPPGWKPGDSISPEHVTRNELREIREEIIKLKRDMLDLKSKKEEEALAIVVTSSPCLSSVNYRDYDSQVSKQEIYAELVHKKARVEEQLKEITLTLNDMEGQLGMLKPTMSESLTPPALLLGPTSSLTENIGEVTREVEEGTNDKGTKSADTQMVRGSAAEHKAAKIERLKSGFKICKPRGTFMWPNMSVSPHVVANLDELTVVPTPTSVSSSATSAPKLVSNTKTGKLPLSPSSPVKPLAERRPVSTTTLSHVTGPFSPHLSPPLETSKSTITKKDSSINLNETPLAQE 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g00051 732 Coils Coil 456 483 - -
Vivi7g00051 732 MobiDBLite consensus disorder prediction 648 732 - -
Vivi7g00051 732 MobiDBLite consensus disorder prediction 302 325 - -
Vivi7g00051 732 CDD RNase_HI_RT_Ty1 1 87 - -
Vivi7g00051 732 MobiDBLite consensus disorder prediction 648 673 - -
Vivi7g00051 732 MobiDBLite consensus disorder prediction 579 605 - -
Vivi7g00051 732 PANTHER PROTEIN DYAD 96 714 IPR044221 GO:0007131|GO:0051177|GO:0051321
Vivi7g00051 732 Coils Coil 262 289 - -
Vivi7g00051 732 Coils Coil 517 544 - -
Vivi7g00051 732 MobiDBLite consensus disorder prediction 687 732 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g00051 Vivi-Chr7 2655906 2664785 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g00051 332 423 PHD Transcription Factor Family AT5G22260 37.500 5.94e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g00051 - - vvo:131593274 1255.74