Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g00042 ATGCTGATATTAGTTCTAGGAATAACTTCAGCTACTTTGCTTGTGATTGTTGCTATTTTCGGCTTTTGTTACTTGCAAAGATCATCAAAACATGAGATTAAAGACATAGAAAGCTTTGAAGAAAAGCATCAAGAGGTGAAGGAGGATTTAATCATATTTGAAGGTGGAGAGGATTTGACAATATGTGATATATTGGATGCACCAGGGGAAGTGATTGGAAAATCAAATTATGGAACACTTTATAAGGCTTTGTTGCAAAGGAGCAACAAGGTTAGGTTATTGAGGTTTTTGAGACCTGTTTGTACTACAACAGGTGAAGAATTGGATGAAATGATTCTGTTTCTTGGAAGATTAAAGCATCCTAATTTGGTTCCTCTTTTGGGATTTTATACTGGGCCAAGAGGTGAGAAGCTTCTTGTTCATCCATTTTATCGACATGGGAATCTTACTCAGTTCATAAGAGATGGAAATGGAGAGAGTTACAAATGGACAAACATATATACAATATCAATTGGTATAGCAAAAGGATTAGAACATCTTCACACAGCACAAGAAAAACCAATTATCCATGGAAACCTAAAATCGAAAAACATCCTTTTAGACAGTTCCTATCAACCACACATCTCAGATTCAGGTCTCCATCTTCTGTTGAATCCAACTGCATCCCAAGAAATGCTTGAAAGTTCGTCTGCTCAAGGCTATAAAGCTCCCGAACTAATCAAAATGAAGGATGCTAGTGAGGAAACCGATATCTATAGCCTCGGCGTAATCTTGCTTGAAATGCTTTCAGGAAAGGAACCTATCAATGACCATCCGACTCCTGACGAGGATTTCTATTTGCCGAATATCATGAGAAATGCTGTTCTTGGCCACAGAATTTCTGATTTATATCATCCTGCTATTCTTCTCAGAAACGGCGTAGATGATGAAATTCAAGTTACGGAAGAATGTGTTCTCAAATTTTTTCAACTTGCTATGGCTTGTTGTTCTCCTTCACCTTCAATTAGACCTAACATTAAGCAAGTTATTAGGAAGCTTGAAGAAATTATACACTAG 1056 0.3703 MLILVLGITSATLLVIVAIFGFCYLQRSSKHEIKDIESFEEKHQEVKEDLIIFEGGEDLTICDILDAPGEVIGKSNYGTLYKALLQRSNKVRLLRFLRPVCTTTGEELDEMILFLGRLKHPNLVPLLGFYTGPRGEKLLVHPFYRHGNLTQFIRDGNGESYKWTNIYTISIGIAKGLEHLHTAQEKPIIHGNLKSKNILLDSSYQPHISDSGLHLLLNPTASQEMLESSSAQGYKAPELIKMKDASEETDIYSLGVILLEMLSGKEPINDHPTPDEDFYLPNIMRNAVLGHRISDLYHPAILLRNGVDDEIQVTEECVLKFFQLAMACCSPSPSIRPNIKQVIRKLEEIIH 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g00042 351 Gene3D Phosphorylase Kinase; domain 1 67 143 - -
Vivi7g00042 351 ProSiteProfiles Protein kinase domain profile. 66 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g00042 351 SUPERFAMILY Protein kinase-like (PK-like) 69 348 IPR011009 -
Vivi7g00042 351 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 37 349 - -
Vivi7g00042 351 Gene3D Transferase(Phosphotransferase) domain 1 145 351 - -
Vivi7g00042 351 Pfam Protein tyrosine and serine/threonine kinase 70 346 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g00042 Vivi-Chr7 2068032 2070322 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g00042 23 349 Carbohydrate Esterase AT5G61570 58.876 1.41e-138 396
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Vivi7g00042 PK_Tyr_Ser-Thr 1.3e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g00042 - - gmx:100788898 594.734