Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g00017 ATGGCAAAAACAAAACAACTTCTGTCACCACTCCTTGAAGAACCACTCTCCGCTTCTTCCTCCGAGGAAGATTCATCGGAAGATATTCTTCCGAAGAAGAAGCTGATACTTCAATCCAAAAACCCTCCACCTCTTGCTTCCAAAAACCCTAAACCACCATCATCTTCTGAATCCGAATCTTGGTCAGAGTCTGAATCCGAAACCGATTCTGATTCGGAACCGGAACCCACTCCACCTGTAAAACCACTTGCATCGCCGTTGAAGATTCTAACCACTCCTTCACCGGCTAAAGCTGGAACCAAGCGTGCTATTGAGTTTCAAACCACTGGAACCAAGCGTGCGGCTGATAACAACGGCACTGACTCTGACTCTTCTAAACGTTTGAAGAAGAAAGAAAACAAAACCGAACGTCGTGGTTCCAATGACGAGAAGGAAGCGGCGAGAGACTCTGTCAAAAAGGTGTCGGCTCAGAGACTCTTCAGCGAGGAAGACGAACTCGCCATTCTGAAAGGTCTAGCTGATTTCATTTCAACTAAAAATGATCCTTTGGAAAACACACAAGCATTTTACAATTTTGTGAAGAACTCTATTCGAGCTGACGCAAACAAGCGTCAACTTAGGCGTAAGGTTCTTGCTCTGAAGAAAAAGTTTGAAAGAAATGATGAAAATTTCACCAAAGAACATGATCAGAAAGCTTTTGAACTTTTCAAGAAGATTGGGTTTAAAAAACAGAGAACACCGAAAAAGGGCTTGGGTTCGGATTCTCTTTCTGCAAAGAACGAAGGTGCTGTGAAAAATGTTAAAAACAGTTTGGCTTTTAAGGAAATGTCTAAGTTTGGTAATTGTTTCGGGTTGTCTTTGGATGCTATGGAAAAGGGAATGGAATTGATGGGAGAATCAAAAAATGCTATGTTAGAAGAAAAATGGAAGAAGGTTCAGATTGTTGAGATGAAGTTGCTTATGACTCGAGCGGGGCTGGTTAAAGAACAAGCTAGCATGATACTGGAGTCATTAGTTTGA 1020 0.4196 MAKTKQLLSPLLEEPLSASSSEEDSSEDILPKKKLILQSKNPPPLASKNPKPPSSSESESWSESESETDSDSEPEPTPPVKPLASPLKILTTPSPAKAGTKRAIEFQTTGTKRAADNNGTDSDSSKRLKKKENKTERRGSNDEKEAARDSVKKVSAQRLFSEEDELAILKGLADFISTKNDPLENTQAFYNFVKNSIRADANKRQLRRKVLALKKKFERNDENFTKEHDQKAFELFKKIGFKKQRTPKKGLGSDSLSAKNEGAVKNVKNSLAFKEMSKFGNCFGLSLDAMEKGMELMGESKNAMLEEKWKKVQIVEMKLLMTRAGLVKEQASMILESLV 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g00017 339 PANTHER BNAANNG10740D PROTEIN-RELATED 52 336 IPR007592 GO:0006355
Vivi7g00017 339 MobiDBLite consensus disorder prediction 119 155 - -
Vivi7g00017 339 Coils Coil 203 223 - -
Vivi7g00017 339 MobiDBLite consensus disorder prediction 1 155 - -
Vivi7g00017 339 MobiDBLite consensus disorder prediction 104 118 - -
Vivi7g00017 339 Pfam Protein of unknown function, DUF573 157 239 IPR007592 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g00017 Vivi-Chr7 247999 274299 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g00017 8 337 GeBP Transcription Factor Family AT1G61730 28.535 7.08e-24 99.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Vivi7g00017 DUF573 3.1e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g00017 - - vvo:131658367 411.379