Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi799g00008 ATGGCCAAAAATTGCTATAACCCCAAAACGCAGACGTATTCCTCACCAAGACAACCCATCCACATTCCAACCGATCCCAATCTCTCCCTAACCTCCTTCCTCTTCCAATCCACTTCCTCCGCCGCCGACACCGTCGCTCTTGTCGATGCCCAAACCGGTGACTCCCTAACCTTCCGCCAACTTAAAACACAAGTCACCGCCCTCTCCCGCTCCTTACTCCGCCTCGGCATCAAACGAGGCGACGTCGTTTTGCTATTCGCTCCTAACTCCATACGCTTCCCTGTCTGCTTCTTAGCTATAGTTTCCATAGGTGCTATTGCCACCACCTGTAGTCCTTTATACACCGTCTCCGAACTCACCAAACAAATCCAAGACTCCAATCCCAAACTTGCCTTTACCGTATTGGAACTTCTAGATAAAATCGAACAGTTACCCTTGGATTTACCTTCAATATTGCTTGACGATGCTTCATACCTATTATTTCCTCCAAAAAAATTCAGTTCTTTGGTTTGGGACTACCAGGAACTTACCGGAGAGTCAAACGAAAGTTCCGAAGAGTTGTTTCCGGCAAACTGTTTCGTTTCACAATCCGATGTGGCGGTGATTCTGTACTCTTCAGGAACCACTGGGAGAAGTAAAGGAGTAATGCTGACTCACAAGAACTTCATAGCGACGGCAGTGGCAGGAACGGCGGATCAGGATTTCTACGGTGAGGGGAAGAATGTGTTCTTATGTTTGGTGCCAATGCATCATGTGATGGGATTGGCAGTGATAACGTACACGCAGCTGCGGAGAGGGAATACGGTGGTGATAATGGGTAAATTTGAACTGGAGAAGACTTTGGCGGCTGTGGAGAAGTTTAAGGTGACGCATTTGTATGTTGCTCCACCGGTGATGGTGGAGCTCGTCAATCGGCGCCAGGTTGTGGACAGTTACAACTTGTCGTCGCTGAAACAACTTGCCGGTGGTGCTGCTCCTTTAGGAAAAGATCTGATGCAAGAGTGTGCTAAAATTCTACCAAAAATTGAAATCATTCAGGGGTATGGCATGACTGAAGGATGTGGACTTATTTCCTATGAAAATCCAAAGGAAGAGTGGTTCATTTCTGGTTTAGGTTCAACTGGAACACTGCTTCCTGGTTTCGAATCCCAAATAGTTAGTTTGGAAACATCTAAACCCCTTCCACCAAATCAAGTAGGAGAGATTTGGTTAAAAGGACCTTCTATGATGAAAGGATATTTTAACAATCCAGAAGCTACGAAACTGACGATTAATGATGAGGGTTGGATGATTACCGGAGATCTTGGATATTTTAACGAAAAGGGAGAACTATTTGTTGTGGATCGTATAAAAGAGCTCATCAAATGTAGCGGGTATCAAGTGGCTCCAGCTGAACTTGAAGACTTATTAATTTCTCACCCTGAAATTTCTGATGCTGGGGTGATCCCATCCCCTGATGCCAAAGCTGGTGAGGTTCCGGTGGCATTTGTTGTTCGTGCCCCCAATAGCTCGATAACTGAAGAGGACATTCTGAAGTTTGTAGCAAAACAGGTAGCACCATACAAAAGGTTGCGACGAGTGACTTTCATAGACAAGATTCCAAAGTCACCCACTGGAAAGATCTTAAGAAAGGATCTTGTCATTTTGGATCAACAAATGAGATCAAAGTTATAG 1674 0.4516 MAKNCYNPKTQTYSSPRQPIHIPTDPNLSLTSFLFQSTSSAADTVALVDAQTGDSLTFRQLKTQVTALSRSLLRLGIKRGDVVLLFAPNSIRFPVCFLAIVSIGAIATTCSPLYTVSELTKQIQDSNPKLAFTVLELLDKIEQLPLDLPSILLDDASYLLFPPKKFSSLVWDYQELTGESNESSEELFPANCFVSQSDVAVILYSSGTTGRSKGVMLTHKNFIATAVAGTADQDFYGEGKNVFLCLVPMHHVMGLAVITYTQLRRGNTVVIMGKFELEKTLAAVEKFKVTHLYVAPPVMVELVNRRQVVDSYNLSSLKQLAGGAAPLGKDLMQECAKILPKIEIIQGYGMTEGCGLISYENPKEEWFISGLGSTGTLLPGFESQIVSLETSKPLPPNQVGEIWLKGPSMMKGYFNNPEATKLTINDEGWMITGDLGYFNEKGELFVVDRIKELIKCSGYQVAPAELEDLLISHPEISDAGVIPSPDAKAGEVPVAFVVRAPNSSITEEDILKFVAKQVAPYKRLRRVTFIDKIPKSPTGKILRKDLVILDQQMRSKL 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi799g00008 557 FunFam 4-coumarate--CoA ligase 2 452 552 - -
Vivi799g00008 557 Gene3D - 452 554 IPR045851 -
Vivi799g00008 557 SUPERFAMILY Acetyl-CoA synthetase-like 22 548 - -
Vivi799g00008 557 FunFam Long-chain-fatty-acid--CoA ligase FadD 14 451 - -
Vivi799g00008 557 CDD 4CL 22 546 - -
Vivi799g00008 557 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 7 547 - -
Vivi799g00008 557 Pfam AMP-binding enzyme C-terminal domain 465 540 IPR025110 -
Vivi799g00008 557 ProSitePatterns Putative AMP-binding domain signature. 202 213 IPR020845 -
Vivi799g00008 557 Gene3D - 12 451 IPR042099 -
Vivi799g00008 557 Pfam AMP-binding enzyme 40 456 IPR000873 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi799g00008 1 557 Monolignol Biosynthesis Gene Families AT4G05160 57.092 0.0 627
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi799g00008 K01904 - psat:127097095 900.582