Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi799g00002 ATGGGAGGCAAATGTCCGCACAGAAAGGTGAAGAAGAGAAGATTATCTCACAAAACCGATCGCCGTGCCAGATTCCTCATCAAAGGCGATGACATGGTTTATGATGAATTGAAAAAGCCTGAAGAAGAGAGAAAAGCTTTACCTGTTGATGAAGATTTGCCTGGAATGGGCCAGCACTATTGTCTTCACTGCGATCGATTCTTTGCCAATGTATCTGTGAGGGATGATCATTTTAAGACCAAAAAACACAGGAGACGTGTGAAACAAATGATGGGTGATGCACCACACACTCAACTTGATGCTGAGTTAGCTGCAGGGATGGGAATGCCAGATAATGGACCCAAGTTAATGTCTATGTAA 360 0.4333 MGGKCPHRKVKKRRLSHKTDRRARFLIKGDDMVYDELKKPEEERKALPVDEDLPGMGQHYCLHCDRFFANVSVRDDHFKTKKHRRRVKQMMGDAPHTQLDAELAAGMGMPDNGPKLMSM 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi799g00002 119 Pfam Zinc-finger double-stranded RNA-binding 58 84 IPR022755 -
Vivi799g00002 119 Gene3D Classic Zinc Finger 45 109 - -
Vivi799g00002 119 FunFam Zinc finger protein 593 45 109 - -
Vivi799g00002 119 ProSitePatterns Zinc finger C2H2 type domain signature. 61 83 IPR013087 -
Vivi799g00002 119 SUPERFAMILY beta-beta-alpha zinc fingers 46 110 IPR036236 -
Vivi799g00002 119 PANTHER EXPRESSED PROTEIN 1 119 - -
Vivi799g00002 119 SMART ZnF_U1_5 56 90 IPR003604 GO:0003676|GO:0008270
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi799g00002 3 118 C2H2 Transcription Factor Family AT2G36930 77.586 2.22e-64 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi799g00002 K14821 - zju:107431907 226.098