Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi798g00002 ATGTCACTCTCCACCACAACTTCTCACCTCACAATCCTCCCTTCTCCACTTCCTTCCATTTCACCACTCTCTCTCAGATTCTCCTTCACTTTCCGGCAAAACATAACCCAAAAAACTCACCCTACAACCCTCTTGTCTTCTTCTTCAACAAAATCTACCAGATTCTTGGTGAAGTCTCAGTCTACTTCTTCACCTGCTTCTTCCGAGGCTGTGAAAGTGATATCTGTCCCTTCTGAAATGAAGGCCTGGGTTTATGGAGAATATGGAGGTGTTGATGTTTTGAAATTTGACTCCAATGTTGCTGTTCCTGATGTTAAGGATGATCAGGTTCTTGTTAAGGTTTTTGCTGCTGCTCTTAATCCTGTTGATGGTAAAAGAAGGCAGGGAAAGTTTAAGGCTACTGATTCTCCTCTTCCGACTGTTCCTGGCTATGACGTGGCTGGGGTTGTTGTGAAAGTTGGAAGTGAAGTAAAGGAATTCAAAGTAGGTGATGAAGTGTATGGTGATGTAAATGAGAAAGCACTAGAAGGGCCTAAACAGTTTGGATCTCTTGCTGAATACACAGCAGTTGAGGAGAAATTGTTGGCACTAAAACCTAAGAATTTGGACTTTGCTCAAGCTGCTTCTCTTCCTCTTGCAATTGAGACTGCTCATGAAGGTTTGGAGAGGACTGGATTTTCTTCGGGTAAATCTATTCTTGTTCTTAATGGTTCTGGTGGAGTTGGAAGCCTTGTAATTCAGCTAGCTAAACAAGTTTTTGGAGCTTCAAGAGTTGCGGCCACTGCAAGTACTAGAAATTTGGAGCTGTTGAAAAGCCTTGGAGCTGATTTGGCTATTGACTACACAAAGGAGAACTTTGAAGACTTACCAGAAAAATTTGATGTAGTTTATGATGCCATAGGGCAATGTGATAGGGCGGTGAAGGCTATTAAAGAAGGTGGAAGTGTAGTAGCATTAACGGGTGCTGTTACACCACCAGGATTCAGATTTGTAGTAACTTCCAATGGAGCTGTTTTGAAGAAACTAAATCCTTATTTAGAGAGTGGAAAAGTGAAGCCAATAGTCGATCCAAAAGGTCCATTCACCTTTGATAAGGTTGCTGAAGCTTTCTCTTACATTGAAACAAACAAAGCCACTGGAAAGGTTGTTATATTCCCTATTCCATGA 1167 0.4165 MSLSTTTSHLTILPSPLPSISPLSLRFSFTFRQNITQKTHPTTLLSSSSTKSTRFLVKSQSTSSPASSEAVKVISVPSEMKAWVYGEYGGVDVLKFDSNVAVPDVKDDQVLVKVFAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGSEVKEFKVGDEVYGDVNEKALEGPKQFGSLAEYTAVEEKLLALKPKNLDFAQAASLPLAIETAHEGLERTGFSSGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATASTRNLELLKSLGADLAIDYTKENFEDLPEKFDVVYDAIGQCDRAVKAIKEGGSVVALTGAVTPPGFRFVVTSNGAVLKKLNPYLESGKVKPIVDPKGPFTFDKVAEAFSYIETNKATGKVVIFPIP 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi798g00002 388 Gene3D - 221 335 - -
Vivi798g00002 388 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 202 325 IPR036291 -
Vivi798g00002 388 SUPERFAMILY GroES-like 77 234 IPR011032 -
Vivi798g00002 388 SMART PKS_ER_names_mod 89 384 IPR020843 GO:0016491
Vivi798g00002 388 Pfam Zinc-binding dehydrogenase 273 384 - -
Vivi798g00002 388 CDD MDR_like_2 80 384 - -
Vivi798g00002 388 ProSitePatterns Quinone oxidoreductase / zeta-crystallin signature. 229 250 IPR002364 GO:0008270|GO:0016491
Vivi798g00002 388 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 71 388 IPR044626 GO:0016628
Vivi798g00002 388 Gene3D - 87 384 - -
Vivi798g00002 388 Pfam Alcohol dehydrogenase GroES-like domain 108 170 IPR013154 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi798g00002 104 276 Monolignol Biosynthesis Gene Families AT4G39330 24.623 8.93e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi798g00002 K18980 - gmx:100780585 577.4