Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi795g00021 ATGTCTTCTCACGATTCACGTGGCATGGTAATGAATTGCATGTGTAAAGGAGCAGCTGATTTTCTAATCAAACCTGTTCGGAAGAATGAGCTTATGAACTTATGGCAGCATGTTTGGAGAAAGCATGTTCTTAACAGGCCTCTCCAAAATACATCTGCACAAGACAAACTTAAAATTGCCATAGAAGACAATTTTACTGGCAATCAATCGACTGATTCTGTTTCTGTGGCTTCCTCTCAGAAAAATAATGAATGCAGTGTGCAATTGAGTGAGGCTCAAGTAACAAAACTTGAAAGGGAACCAACTAAGCTTAATGATGAAGCAAGAGACTCGAGGCTAGAGCAAGACTACAGAACTTCTGAAGTTGAATCCAAAAATGAATTATTTAGAGGCAAGTTAAGCAGAGAGAACCATGATAATGACACTGATACTGAGATACGTGGATGCAGTGATGAACTGATAGAACCTTCTTGCAAAGCTATTGACTTGATTTCCACAGTTGGGAATCTCCAAAAACGCACTAAGGAAATCCATTGCATTACTGGTGATGAAGAAACCAAGTTTGATTTTGAAAAAGAATTGGAGCTATCTTTAAGAAGTGATTATTCTGGCAGCTCATGCAAACAAGCAAGTGAAGCAACTGAGGAATGGCAACGATTGAATCACTCAAATACTTCTGCCTTTTCCCAGTATGATGGTAGTAAGATGTTGTGGCCACTTTTTCAAAACTACAATTGGAGCTCTAATAATCCTCATGAATTATCAGTAGTTACTGCTGATAAGTGCATTCAATACGGTGGCCCAATTAAAATAGAAGATATGACTAACGCAGTCACGGCTCATTATGGACAATTTGGACCAAAATTATTTAACACTGGACTCTTAGCTGATAATGTTCTCCATCACATGCGGGTTCCTAAAGCAAATTTCCAAAAAGAGAGCTCTCCCTTTCCCTCAAGTTCCTCTTCCCAGTCCAATCCTGAAAGTCACAATTCAGACCATCATCATAATTGCTCTTATGATGCTAACTACAGCTTTCTTAATCAAAATGTTGCTGAAAAATATGATTTGGATCATGTAGTACATGATTCTCCGAGTGTTGGTTCGGGATTCGGCAATGACATTTGCCAAGCTTCAAATTATATTAATAGTGGCAATGATGAAAGAGCTACTTCAAATCTGGTTACAAAGAATTCAAGAAGTTCTAATGATTGTAGGCGCAACAGAAAAGATAGTTATGATTATGATTATGATGATGATGAATTTAGATTGAGTGATTCTCATCGCTCCAGTCAAAGAGAAGCAGCTCTAACAAAGTTTCGTTTAAAGCGAAAAGAGAGATGCTTCGCGAAAAAGGTTCGGTATCAGAGTCGGAAAAAAATCGCAGAGCAGCGCCTTCGGGTGAAAGGGCAGTTCGTACGTAGAGTATACGGTGATGATGATCATCCAAATGCAGATGCTAATGGTGATCAATGA 1476 0.3869 MSSHDSRGMVMNCMCKGAADFLIKPVRKNELMNLWQHVWRKHVLNRPLQNTSAQDKLKIAIEDNFTGNQSTDSVSVASSQKNNECSVQLSEAQVTKLEREPTKLNDEARDSRLEQDYRTSEVESKNELFRGKLSRENHDNDTDTEIRGCSDELIEPSCKAIDLISTVGNLQKRTKEIHCITGDEETKFDFEKELELSLRSDYSGSSCKQASEATEEWQRLNHSNTSAFSQYDGSKMLWPLFQNYNWSSNNPHELSVVTADKCIQYGGPIKIEDMTNAVTAHYGQFGPKLFNTGLLADNVLHHMRVPKANFQKESSPFPSSSSSQSNPESHNSDHHHNCSYDANYSFLNQNVAEKYDLDHVVHDSPSVGSGFGNDICQASNYINSGNDERATSNLVTKNSRSSNDCRRNRKDSYDYDYDDDEFRLSDSHRSSQREAALTKFRLKRKERCFAKKVRYQSRKKIAEQRLRVKGQFVRRVYGDDDHPNADANGDQ 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi795g00021 491 Pfam CCT motif 433 475 IPR010402 GO:0005515
Vivi795g00021 491 Gene3D - 1 146 - -
Vivi795g00021 491 SUPERFAMILY CheY-like 1 55 IPR011006 -
Vivi795g00021 491 MobiDBLite consensus disorder prediction 100 126 - -
Vivi795g00021 491 ProSiteProfiles Response regulatory domain profile. 1 39 IPR001789 GO:0000160
Vivi795g00021 491 MobiDBLite consensus disorder prediction 386 412 - -
Vivi795g00021 491 ProSiteProfiles CCT domain profile. 433 475 IPR010402 GO:0005515
Vivi795g00021 491 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 209 478 IPR045281 GO:0009909
Vivi795g00021 491 MobiDBLite consensus disorder prediction 386 401 - -
Vivi795g00021 491 MobiDBLite consensus disorder prediction 311 335 - -
Vivi795g00021 491 MobiDBLite consensus disorder prediction 312 328 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi795g00021 386 479 Response Regulator Gene Family AT2G46790 54.255 1.39e-19 87.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Vivi795g00021 CCT 4.6e-15 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi795g00021 K12130 - gmx:100791698 357.836