Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi795g00020 ATGAATGAATCAGAGAAGAAGAAGAACGATGGTGATGATCACTGTAAAGAGGTTTTTCGATGGGAATTGTTTCTACCAAAGAAAACGGTTACTGTTCTTCTGGTTGAATCCGATCGTTCTACTCGTCGGTTAATTACTTCACTTCTAATGAATTGCAATTATAAAGTTATTGCTGTTTCTGATGGAGTAAAGGCATGGAAGACTTTGCAAATGAAGGAAATTGATGTTGATATTGTATTAGCAGAAATGGAGTTGCCTGAAATATCTGGATTAGCACTTCTTTCGTTAATGGTGGAGCATGAAACTTGCAGAAACATTCCTCTTATAATGATGTCTTCTCACGATTCACGTGGCATGGTAATGAATTGCATGTGTAAAGGAGCAGCTGATTTTCTAATCAAACCTGTTCGGAAGAATGAGCTTATGAACTTATGGCAGCATGTTTGGAGAAAGCATGTTCTTAACAGGCCTCTCCAAAATACATCTGCACAAGACAAACTTAAAATTGCCATAGAAGACAATTTTACTGGCAATCAATCGACTGATTCTGTTTCTGTGGCTTCCTCTCAGAAAAATAATGAATGCAGTGTGCAATTGAGTGAGGCTCAAGTAACAAAACTTGAAAGGGAACCAACTAAGCTTAATGATGAAGCAAGAGACTCGAGGCTAGAGCAAGACTACAGAACTTCTGAAGTTGAATCCAAAAATGAATTATTTAGAGGCAAGTTAAGCAGAGAGAACCATGATAATGACACTGATACTGAGATACGTGGATGCAGTGATGAACTGATAGAACCTTCTTGCAAAGCTATTGACTTGATTTCCACAGTTGGGAATCTCCAAAAACGCACTAAGGAAATCCATTGCATTACTGGTGATGAAGAAACCAAGTTTGATTTTGAAAAAGAATTGGAGCTATCTTTAAGAAGTGATTATTCTGGCAGCTCATGCAAACAAGCAAGTGAAGCAACTGAGGAATGGCAACGATTGAATCACTCAAATACTTCTGCCTTTTCCCAGTATGATGGTAGTAAGATGTTGTGGCCACTTTTTCAAAACTACAATTGGAGCTCTAATAATCCTCATGAATTATCAGTAGTTACTGCTGATAAGTGCATTCAATACGGTGGCCCAATTAAAATAGAAGATATGACTAACGCAGTCACGGCTCATTATGGACAATTTGGACCAAAATTATTTAACACTGGACTCTTAGCTGATAATGTTCTCCATCACATGCGGGTTCCTAAAGCAAATTTCCAAAAAGAGAGCTCTCCCTTTCCCTCAAGTTCCTCTTCCCAGTCCAATCCTGAAAGTCACAATTCAGACCATCATCATAATTGCTCTTATGATGCTAACTACAGCTTTCTTAATCAAAATGTTGCTGAAAAATATGATTTGGATCATGTAGTACATGATTCTCCGAGTGTTGGTTCGGGATTCGGCAATGACATTTGCCAAGCTTCAAATTATATTAATAGTGGCAATGATGAAAGAGCTACTTCAAATCTGGTTACAAAGAATTCAAGAAGTTCTAATGATTGTAGGCGCAACAGAAAAGATAGTTATGATTATGATTATGATGATGATGAATTTAGATTGAGTGATTCTCATCGCTCCAGTCAAAGAGAAGCAGCTCTAACAAAGTTTCGTTTAAAGCGAAAAGAGAGATGCTTCGCGAAAAAGGTTCGGTATCAGAGTCGGAAAAAAATCGCAGAGCAGCGCCTTCGGGTGAAAGGGCAGTTCGTACGTAGAGTATACGGTGATGATGATCATCCAAATGCAGATGCTAATGGTGATCAATGA 1806 0.3821 MNESEKKKNDGDDHCKEVFRWELFLPKKTVTVLLVESDRSTRRLITSLLMNCNYKVIAVSDGVKAWKTLQMKEIDVDIVLAEMELPEISGLALLSLMVEHETCRNIPLIMMSSHDSRGMVMNCMCKGAADFLIKPVRKNELMNLWQHVWRKHVLNRPLQNTSAQDKLKIAIEDNFTGNQSTDSVSVASSQKNNECSVQLSEAQVTKLEREPTKLNDEARDSRLEQDYRTSEVESKNELFRGKLSRENHDNDTDTEIRGCSDELIEPSCKAIDLISTVGNLQKRTKEIHCITGDEETKFDFEKELELSLRSDYSGSSCKQASEATEEWQRLNHSNTSAFSQYDGSKMLWPLFQNYNWSSNNPHELSVVTADKCIQYGGPIKIEDMTNAVTAHYGQFGPKLFNTGLLADNVLHHMRVPKANFQKESSPFPSSSSSQSNPESHNSDHHHNCSYDANYSFLNQNVAEKYDLDHVVHDSPSVGSGFGNDICQASNYINSGNDERATSNLVTKNSRSSNDCRRNRKDSYDYDYDDDEFRLSDSHRSSQREAALTKFRLKRKERCFAKKVRYQSRKKIAEQRLRVKGQFVRRVYGDDDHPNADANGDQ 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi795g00020 601 MobiDBLite consensus disorder prediction 496 522 - -
Vivi795g00020 601 Pfam CCT motif 543 585 IPR010402 GO:0005515
Vivi795g00020 601 MobiDBLite consensus disorder prediction 421 445 - -
Vivi795g00020 601 ProSiteProfiles CCT domain profile. 543 585 IPR010402 GO:0005515
Vivi795g00020 601 PANTHER TWO-COMPONENT RESPONSE REGULATOR 31 334 IPR045279 GO:0009736
Vivi795g00020 601 MobiDBLite consensus disorder prediction 208 236 - -
Vivi795g00020 601 Gene3D - 30 256 - -
Vivi795g00020 601 MobiDBLite consensus disorder prediction 496 511 - -
Vivi795g00020 601 ProSiteProfiles Response regulatory domain profile. 31 149 IPR001789 GO:0000160
Vivi795g00020 601 Pfam Response regulator receiver domain 32 143 IPR001789 GO:0000160
Vivi795g00020 601 SUPERFAMILY CheY-like 30 165 IPR011006 -
Vivi795g00020 601 SMART REC_2 30 145 IPR001789 GO:0000160
Vivi795g00020 601 MobiDBLite consensus disorder prediction 422 438 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi795g00020 528 586 Response Regulator Gene Family AT5G24470 65.574 6.20e-17 82.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Vivi795g00020 Response_reg 8.2e-19 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi795g00020 K12130 - gmx:100791698 474.937