Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi791g00004 ATGTTCCCAGCTGTTAGAACCATAGCTCTACACTCATCTTCACTATGCACTGTCTCTTCAGAGAAACCATCATCACCATCACCACCTTCCTCAATTTCCAAACCAAACACAACCCTTTTAATTCCCAAACCCAAAAGCCTCCTCCAAAACCACCCTCTTTACACACCAACTCAAGAAAAACTCTCCCTTCAATTCAAAGAGAAAATCCTATGTCTTGAAGTAATGGGCATTGATTCAGGTAAAGCACTTTCCCAGAACCCTACTCTTCACACAGCCTCCTTGGAATCCATTCACTCCATTATCTCCTTCCTTGTCTCCAAAGGCATCCTACATAAAGACCTTCCAAGAATCTTTGGCATGTGTCCAACGATTCTTACTTCAAGCATCAAAACTGATCTCAACCCAGTTTTTGATTTTCTTGTGCATGAACTCAAAGTGCCTGATCATAGCTTTAGAAAAGTTGTGAAAAAGTGTCCAAGGCTGCTTACTTCAAGTGTGGTGAATCAGCTTAAACCAGCTTTGTTTTATTTGAGGAGATTAGGGTTAAGGGATTTAGAGGCTTTGGCTTATCAAGATTGTGTGCTTTTGGTTTCCAATGTTGAGAGGACACTTATACCTAAGCTTAAGCATTTGGAGAGTATGGGATTTAGTAAAGAAGAGGTTAGGTTTATGGTTTTGAGGTGTCCTGCATTGTTGACTTTTAGTATTGAGAATAATTTTCAGCCAAAGTTTGAGTATTTTTCTGTGGAAATGGGGGGGAAATTGGAGGAGTTGAAAGAGTTTCCTCAGTATTTCTCTTTTAGTTTGGAGAATAGGATTAAAGTTAGATACATGGAGGTTGTTGATAGTGGAGTCAATTTGCCTTTGTCATTGATGCTTAAAAGTACTGATGATGAGTTTAGGGAGTTGATAAAGAAAGGGACTAGAGGTGGATGA 936 0.3942 MFPAVRTIALHSSSLCTVSSEKPSSPSPPSSISKPNTTLLIPKPKSLLQNHPLYTPTQEKLSLQFKEKILCLEVMGIDSGKALSQNPTLHTASLESIHSIISFLVSKGILHKDLPRIFGMCPTILTSSIKTDLNPVFDFLVHELKVPDHSFRKVVKKCPRLLTSSVVNQLKPALFYLRRLGLRDLEALAYQDCVLLVSNVERTLIPKLKHLESMGFSKEEVRFMVLRCPALLTFSIENNFQPKFEYFSVEMGGKLEELKEFPQYFSFSLENRIKVRYMEVVDSGVNLPLSLMLKSTDDEFRELIKKGTRGG 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi791g00004 311 Pfam mTERF 195 300 IPR003690 GO:0003690|GO:0006355
Vivi791g00004 311 Pfam mTERF 72 184 IPR003690 GO:0003690|GO:0006355
Vivi791g00004 311 MobiDBLite consensus disorder prediction 17 36 - -
Vivi791g00004 311 PANTHER CGI-12 PROTEIN-RELATED 25 304 IPR003690 GO:0003690|GO:0006355
Vivi791g00004 311 FunFam Transcription termination factor MTEF1, chloroplastic 142 308 - -
Vivi791g00004 311 Gene3D Transcription termination factor 3, mitochondrial 132 308 IPR038538 -
Vivi791g00004 311 SMART mt_12 152 183 IPR003690 GO:0003690|GO:0006355
Vivi791g00004 311 SMART mt_12 186 217 IPR003690 GO:0003690|GO:0006355
Vivi791g00004 311 SMART mt_12 255 286 IPR003690 GO:0003690|GO:0006355
Vivi791g00004 311 SMART mt_12 222 254 IPR003690 GO:0003690|GO:0006355
Vivi791g00004 311 SMART mt_12 115 147 IPR003690 GO:0003690|GO:0006355
Vivi791g00004 311 SMART mt_12 80 110 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vivi791g00004 mTERF 8.8e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi791g00004 K15031 - gmx:100788221 438.343