Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi78g00074 ATGGAACGACGGAGTAGGTTGGTTTTTGTTTCCGATTTTGTTCTATCTTTCATGTGGGTATGTTCTGGTGTTGTCGTTCGGTTAATCGTCTTCAACATTCTGGGTTTTTCTCATACCCATTTCGCCGAGATTGTGAAGCTTTCGTTTTCCATAGCCAACATGTTCTTGTTTGCTTTCCTTGGCAAGGTTTCTCGTGGTGGGGTCTATAATCCTCTCACTGTTTTGGCTGAGGCTATCTCTGGGAATTTTGGGGACTTTCTCTTCTGTGTTGGTTGTAGAATTCCTGCTCAGGTGTTTGGATCTATTGTTGGAGTTAAATTTCTCATATACACCATTCCCGAAGTAGGACAGGGTCCACGTTTGAATGTTGACATTCATCAGGGATCACTGACAGAAGGATTACTAACATTTGCGATTGTAAGCATTTCACTTGGACTTTCCGCAACTAAAATTTATGGAAATTTCTTCATGAAGACTTGGATTTCCAGTCTCTCCAAGTTAACACTTCACATACTCGGTTCTGATCTCACCGGTGGCTGTATGAACCCCGCATCCGTGATGGGATGGGCTTACGCGCGAGGCGATCACATAACAAAAGAGCACTTCCTTGTTTACTGGCTTGCTCCCATAGAGGGAACTATTTTTGCAGTATGGACATTCAAATGGCTTTTCCGGCCTCGTAAAGAAGATAAAGCAGGCTCAAAAAGAAAATCAGATTGA 720 0.4292 MERRSRLVFVSDFVLSFMWVCSGVVVRLIVFNILGFSHTHFAEIVKLSFSIANMFLFAFLGKVSRGGVYNPLTVLAEAISGNFGDFLFCVGCRIPAQVFGSIVGVKFLIYTIPEVGQGPRLNVDIHQGSLTEGLLTFAIVSISLGLSATKIYGNFFMKTWISSLSKLTLHILGSDLTGGCMNPASVMGWAYARGDHITKEHFLVYWLAPIEGTIFAVWTFKWLFRPRKEDKAGSKRKSD 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi78g00074 239 PRINTS Major intrinsic protein family signature 131 149 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi78g00074 239 PRINTS Major intrinsic protein family signature 7 26 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi78g00074 239 PRINTS Major intrinsic protein family signature 163 185 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi78g00074 239 PRINTS Major intrinsic protein family signature 203 223 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi78g00074 239 PRINTS Major intrinsic protein family signature 89 108 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi78g00074 239 Pfam Major intrinsic protein 9 219 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi78g00074 239 SUPERFAMILY Aquaporin-like 8 231 IPR023271 -
Vivi78g00074 239 Gene3D Glycerol uptake facilitator protein. 6 239 IPR023271 -
Vivi78g00074 239 PANTHER AQUAPORIN SIP2-1-RELATED 7 239 IPR044226 GO:0015267
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi78g00074 10 239 Major Intrinsic Protein MIP AT3G56950 60.606 1.72e-100 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi78g00074 K09875 - gmx:100786138 367.466