Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi78g00073 ATGCCACGACGAAGTAGGTTGGTTGTTGTATCAGATTTTGTTCTATCTTTCATGTGGCTATGTTCTGGTGTTCTGGTTCGATTATTCGTCTTCAAAATTCTCGGTTTTTCTAATACTGATGATCATGTTGCTGAGTTTATGAAGCTCTCATTTTCCATAGCCAACATGTTCTTGTTTGCTTTCCTTGCCAAGGTTTCTCGTGGCGGTGCTTACAATCCTCTCGCTGTTTTGGTCGATGCTATCACTGGAGATTTTTGTAACTTCTTTTTCTGTGTTGGTTTCAGAATTCCTGCTCAGGTGGTTGGATATATTGTTGGAGTAAAACTTGTGATTGGTGCTATTCCGGAAGTAGGACATGGACCACATTTGAATGTTGACATTCTTCAAGGAGCATTGACAGAAGGAATATTAACATTTGTAATTGTAAGCATTTCACTTGTGCTTTCCGCAACAAGAATCAGCAAAAGTTTCTTCATGAAGACTTGGATTTCCAGCCTATCCAAGTTAACACTTCATATACTTGGCTCTAATCTAACCGGTGGTTGTATGAACCCCGCTTCTGTAATGGCATGGACTTATGGTCGAGGGGATCACATAACAATGGAACACATCTTCGTGTATTGGATTGCCCCTGTAATGGCAACTATTCTGGCAATGTGTACATTCAGATTTTTAGTACGACGTTTTAAAACAGGCTCAAAAAGTAAATCAGATTAA 717 0.3947 MPRRSRLVVVSDFVLSFMWLCSGVLVRLFVFKILGFSNTDDHVAEFMKLSFSIANMFLFAFLAKVSRGGAYNPLAVLVDAITGDFCNFFFCVGFRIPAQVVGYIVGVKLVIGAIPEVGHGPHLNVDILQGALTEGILTFVIVSISLVLSATRISKSFFMKTWISSLSKLTLHILGSNLTGGCMNPASVMAWTYGRGDHITMEHIFVYWIAPVMATILAMCTFRFLVRRFKTGSKSKSD 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi78g00073 238 PANTHER AQUAPORIN SIP2-1-RELATED 7 234 IPR044226 GO:0015267
Vivi78g00073 238 PRINTS Major intrinsic protein family signature 91 110 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi78g00073 238 PRINTS Major intrinsic protein family signature 133 151 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi78g00073 238 PRINTS Major intrinsic protein family signature 205 225 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi78g00073 238 PRINTS Major intrinsic protein family signature 7 26 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi78g00073 238 PRINTS Major intrinsic protein family signature 165 187 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi78g00073 238 SUPERFAMILY Aquaporin-like 9 229 IPR023271 -
Vivi78g00073 238 Gene3D Glycerol uptake facilitator protein. 7 236 IPR023271 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi78g00073 8 238 Major Intrinsic Protein MIP AT3G56950 53.846 6.00e-84 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi78g00073 K09875 - gmx:100786138 310.457