Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi78g00054 ATGGAAAACACCGACCATTATGATTCCAACTACTATCGATACCGTGACAGTGGAACATCTGATTCTGAATCGGAGAATGACAGTAATTCGGTGTCCAGTGCGTACCAAAGTTCAAGTGATGGCGATGGCGATGGTGATAGTCACAATGAAAAATTCCATGAATTTGATGCAGTTGTAGGTGATAGAATACTGAAAATTGATGCCCTTACTGCTGATGAAATTCGTGCTATGGAATTCGGTACAGTTGATGAAGCTAATTTGTTTTATTTCAAGTATGCTAAATGTAAAGGGTTTGCCATTAGGAAAAGTGATGTTAGGAGAAGATCGACTGGGGGTGGACAAACAATTATAATGAGGCAGTTTGTATGCAATAAACGCGGTCTAAGAGATACAAAACACTTAAGGAGGCTTGATAGAAAAAGAGAACACAGACCTACGACCCGCACTAATTGTCCCGCTAGGCTTCGTGTGCATTACAACCCCCAGAAGGGTAGTTATGTAGTGTCATGTTTTGAAGAGGCTCACAACCATGAATTAACACCATCTAGGTTTATCCACTTACACCCCATTTATCTCAAATGGAATTAG 588 0.4048 MENTDHYDSNYYRYRDSGTSDSESENDSNSVSSAYQSSSDGDGDGDSHNEKFHEFDAVVGDRILKIDALTADEIRAMEFGTVDEANLFYFKYAKCKGFAIRKSDVRRRSTGGGQTIIMRQFVCNKRGLRDTKHLRRLDRKREHRPTTRTNCPARLRVHYNPQKGSYVVSCFEEAHNHELTPSRFIHLHPIYLKWN 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi78g00054 195 MobiDBLite consensus disorder prediction 1 50 - -
Vivi78g00054 195 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 19 186 - -
Vivi78g00054 195 MobiDBLite consensus disorder prediction 23 42 - -
Vivi78g00054 195 Pfam FAR1 DNA-binding domain 88 180 IPR004330 -
Vivi78g00054 195 MobiDBLite consensus disorder prediction 1 22 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vivi78g00054 FAR1 8.9e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi78g00054 - - vvo:131604575 358.607