Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi78g00053 ATGGGATCTCATGGTGGAGCAATCCAAGCGCCAAAGGCAGGACCTTTGGCTAGAGAAGGATCTTTGTACAATCTCACATTTGATGAGGTGCAAAATCAGCTTGGAAATTTAGGGAAACCCTTAGGAAGCATGAATCTAGATGAGTTACTCAAGAGTTTGTGGACATCTGAAGCTGCTCAAGCTTCTGGATTGGATTCTGGTGCTACTGATGCTTACATGCAACAAGGTCAACTAGCTTCTGGGTCGTCTATGAATCCGCCGGCACTTTCCGGCGATCTTAGCAAGAAGACTATTGATGAGGTTTGGAGAGACATGCAACAGAAGAAGAGTAGTAGTCAAGATAGAAGAACAGCTACACTAGGTGAGATGACTTTGGAAGATTTCTTGATGAAAGCTGGTGTGGCTACTACTGAATCTTTTCCAACAGAGGATAATGCTATTTCAGGAAGGGTTGATTCTCAACAACAACAACAACACAATACATCTCAACAGGGTCATTGGATGCAGTTCCAAATCCCTCCGGTGCAACAATCACAACCACAACAACAGCATCAGCATCAGCATCAAAATCATCAGAATAATATGATGCCTGGTTTTGCAAGCTATATGGCTAGTCATGTGGTTCAACAGCCTGTTTTGGATGCAGGATACAATGATGCAATGGTGAGTATATCGCCGTCTTCTTTAATGGCCACTTCATCGGATACACAAACTCAAGGTAGGAAAAGGGTTGCCTCTGGTGTTGTGGTTGAGAAAACTGTGGAGAGGAGGCAGAAGAGGATGATTAAAAATAGGGAATCTGCCGCTCGGTCGCGGGCTAGAAAACAGGCTTACACACAAGAACTGGAGATCAAAGTTTCACATTTAGAAGAAGAAAATGAAAGGCTTAAAAGACTACATGAGATGGAGAGAGTATTGCCAAGTATGCCACCACCAGATCCTAAGCATCAGCTTCGCAGAACTAGCTCAGCTCCCTTTTGA 981 0.4383 MGSHGGAIQAPKAGPLAREGSLYNLTFDEVQNQLGNLGKPLGSMNLDELLKSLWTSEAAQASGLDSGATDAYMQQGQLASGSSMNPPALSGDLSKKTIDEVWRDMQQKKSSSQDRRTATLGEMTLEDFLMKAGVATTESFPTEDNAISGRVDSQQQQQHNTSQQGHWMQFQIPPVQQSQPQQQHQHQHQNHQNNMMPGFASYMASHVVQQPVLDAGYNDAMVSISPSSLMATSSDTQTQGRKRVASGVVVEKTVERRQKRMIKNRESAARSRARKQAYTQELEIKVSHLEEENERLKRLHEMERVLPSMPPPDPKHQLRRTSSAPF 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi78g00053 326 MobiDBLite consensus disorder prediction 143 165 - -
Vivi78g00053 326 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 254 298 IPR004827 GO:0003700|GO:0006355
Vivi78g00053 326 CDD bZIP_plant_BZIP46 256 302 - -
Vivi78g00053 326 Coils Coil 279 299 - -
Vivi78g00053 326 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 16 325 IPR043452 GO:0003700|GO:0045893
Vivi78g00053 326 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 254 306 - -
Vivi78g00053 326 Gene3D - 254 306 - -
Vivi78g00053 326 Pfam bZIP transcription factor 256 298 IPR004827 GO:0003700|GO:0006355
Vivi78g00053 326 SUPERFAMILY Leucine zipper domain 256 301 IPR046347 GO:0003700|GO:0006355
Vivi78g00053 326 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 259 274 IPR004827 GO:0003700|GO:0006355
Vivi78g00053 326 MobiDBLite consensus disorder prediction 302 326 - -
Vivi78g00053 326 MobiDBLite consensus disorder prediction 175 194 - -
Vivi78g00053 326 SMART brlzneu 252 320 IPR004827 GO:0003700|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi78g00053 1 326 bZIP Transcription Factor Family AT3G56850 52.663 2.29e-95 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vivi78g00053 bZIP_1 2.3e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi78g00053 K14432 - gmx:100783666 379.793