Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi787g00004 ATGAATATCAAAGAACTTCGAGAAGGTGCTGGATACAGCAACGTGCTTATTTTTACCTATAACGAATTGAGGCTTGCGACGAAGCAGTTTCGGCCTGATTTTATACTTGGAGAAGGTGGATTTGGTGTTGTGTATAAAGGTGTTATTGATGATAGTGTAAGAGCGGGTTATAAATCCACTGAAGTCGCTATTAAGGAACTTAATCGCGAAGGGTTTCAAGGCGATAGGGAATGGCTTGCTACAAGACATGCCGAAATGGAAGCTATAGACCTGCTTCTAGAACAGAGGCAGAAAAACAGACTTTCGATGACTGAAGTTGCTAAAAAATTCTCAAACTGCAGTCTTTATGTTACTTGTGAACCGTGCAGAATGTGTGCACCTGCTTTATCAAATTTAGGTATAAAGGAAGTGTTTTATGGCTGTTCAAATGATAAATTTGGAGGTTGTGGATCAATACTATCATTGCATTTAAGTGATGCCGTGTCACCTAATAAAAGGGGTTTCAAATGTGCTGGAGGTATAATGGCAAAAGAAGCTGTCCTTCTCTTTCGAACATTCTACGAGCAATTTTCTCCAATTTTGTGA 585 0.3932 MNIKELREGAGYSNVLIFTYNELRLATKQFRPDFILGEGGFGVVYKGVIDDSVRAGYKSTEVAIKELNREGFQGDREWLATRHAEMEAIDLLLEQRQKNRLSMTEVAKKFSNCSLYVTCEPCRMCAPALSNLGIKEVFYGCSNDKFGGCGSILSLHLSDAVSPNKRGFKCAGGIMAKEAVLLFRTFYEQFSPIL 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi787g00004 194 Gene3D Cytidine Deaminase, domain 2 37 192 - -
Vivi787g00004 194 ProSiteProfiles Cytidine and deoxycytidylate deaminases domain profile. 13 160 IPR002125 -
Vivi787g00004 194 Pfam Cytidine and deoxycytidylate deaminase zinc-binding region 64 140 IPR002125 -
Vivi787g00004 194 SUPERFAMILY Cytidine deaminase-like 80 189 IPR016193 GO:0003824
Vivi787g00004 194 SUPERFAMILY Protein kinase-like (PK-like) 13 86 IPR011009 -
Vivi787g00004 194 ProSitePatterns Cytidine and deoxycytidylate deaminases zinc-binding region signature. 83 129 IPR016192 GO:0008270|GO:0016787
Vivi787g00004 194 CDD nucleoside_deaminase 80 154 - -
Vivi787g00004 194 ProSitePatterns Protein kinases ATP-binding region signature. 36 65 IPR017441 GO:0005524
Vivi787g00004 194 PANTHER CYTOSINE DEAMINASE FAMILY MEMBER 79 190 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi787g00004 17 103 Trihelix Transcription Factor Family AT1G26150 41.379 4.31e-11 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi787g00004 K15441 - gmx:100306437 176.022