Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi77g00008 ATGGATAATATTTTGAGCATGATTTGTGTGCACTGTGGTAGTGGTGATGATGATGGAGGAAAAGCCTTGTGTTATGATTTTAAGTTCTTTAAAGATCCTTCCTCATGCATCAACCATGTGTTAGTACTTTGCTTTGATCTGTTCATGCTAATCATGTTGTCATTCATCATGATTTTGAAGTCTCACTCAAGATCCTTTTGGAGTACAGCAAGATATTCTAAGTTGCAGATAGTTTCTGCCATAGCCAATGGCTCTCTTAGTTTGTTGTATTTATGCTTAGGAATTTCGGATTTCGCGGAGGCTTTACCTTTTAACCAGTGGTTGCAATTGCAAGAACTCTTTCATGGACTTGCATGGTTGTTAGTAAGTTTAAGTATAAGTCTTGAGATAAAACAAATCCCAAGAGCATGGATGTGGTTGTTTTCTATTCTCATGTTCTTTGTTTCTGCTATATTATGCTTTTTATCCTTATCTTATACATTTGAAAGTATAGAATCATTTTCTCTCAAAGTAGCTTTGGATGTTATGTCATTTCCAGGAGCTAATTTGATGCTCTTATGCACATACCAAATATGTAAATGTAAGGATGTTGATAGTGAAATTGATGATAGTCTTTGTACCCCTTTAATCGACGAAGTTATTCCTGTTACCCCATTTGCCAAAGCTGGAGTCTTTAGTAAGATTTGGTTTTGGTGGTTGAATCCATTGATGAAAATCGGTCAAGAGAAAACACTTGATGACGAGGATATCCCAAAATTAAGAGCGTCCGACAGAGTGAAAGTTTGTTATTTATCGTTTTTAGAACGATTAGACAAAAAAAGACAAGAGGATCTATCATCACATTCATTGATTTTATGGACAATCATTCTGTGCCACCAGAGAGAGATTTTGCTAACCGGGTTCTTTGCTTTGCTCAAGGTACTTGCTCTATCTTCAACTCCTCTACTTCTGAGTTCCTTTATATCGGTCGCTGAGGGTAATGAAAGTTTCAAATATGAAGGTTATACATTAGTCATATCACTCTTGTTTATTAAAATCATAGAATCCTTATCACAAAGACAGTGGTATTTCCGTGCTAGACTTGTTGGAATGAAAGTTAGATCAATACTTACTGCGGCCATATATAGAAAAGTATTAAGACTGTCCAATTCTGCTCACTCGGGCGGTGAGATAATGAATTATATCACAGTCGATACTTGTAGAGTCGGAGAATTTCCATTTTGGTTTCACCAGACTTGGACAACAATCCTCCAACTTTGTATTGCATTAGTAATACTTTTCCGCACAATTGGACTAGCAACATTGGCATCATTGGCGGTGATAGTTTTCACTGTGCTTTGCAATGCTCCACTAGCAAAGTTACAACACAAGTTTCAGAGCAAACTTATGGTGGCACAGGATGAGAGATTAAAGGCTACTTCTGAAGCTCTTGTGAATATGAAAGTGTTGAAGCTATATGCATGGGAAATCCATTTTAAAAATGTTGTAGATTACTTAAGAAATGTGGAACTTAAATTGTTATATGTCGTGCAATTAAGAAGAACTTACCTTGTTTTTCTTTTTTGGACCTCGCCGATGTTGGTATCTTCTGCTTCTTTTCTGGCATGTTACTTCTTGAAAGTTCCTTTGCATGCAAGTAATGTTTTCACTTTTTTGGCCACTGTGTGCCTTGTTCAAGAGCCAATTACTCGCATCCCGGATGTTATTGCGGTGGTCATTCAAGCAAAAGTTGCATTTGCTCGAATTGTTAATTTCCTTGATGCACCGGAACTGCAGAGTGAAAATTTGAAGAATGAGTGCCTTGATTTCAGCCTCAAAGGCTCAATTTCTATAAAACATGCCGATTTTTCATGGGAAGGTAATGCATCAAATCCAACATTAAGGAGCATAAGTTTGGAGGTTAGGCATGGCCAAAAGGTGGCTATCTGTGGAGAAGTTGGCTCAGGGAAATCAACCCTTTTAGCAACGATTCTTGGAGAAGTTCCTAAAACAAAGGGAGCTATTGATGTTAATGGGAGGTTTGCATATGTTTCTCAAGCAGCATGGATACAAATAGGAACAATTCGGGAAAATATTTTGTTCGGGTCTAAGTTGGATGATCAAAGATATCAAGAAACACTCGAGAGGTCTTCGTTAGTAAAGGACCTTGAGTTGTTTCCCTATGGGGACCTCACTGAAATAGGTGAGAGAGGAGTTAATTTAAGTGGAGGTCAGAAGCAGCGAATTCAGCTAGCTCGTGCTCTTTATCAGAACGCTGATATATATCTATTGGACGATCCATTTAGCGCTGTTGATGCGCATACTGCAAAAAAATTGATTAATGAATACATCATGGAAGGACTCCAAGGGAAAACAGTTTTACTTGTTACTCATCAAGTCGACTTCCTCCCGGCTTTTGATTCTGTTTTGTTGATGGCTGATGGCGTAATCCTACAAGCTGGTCCATATCACCAGCTATTAAACTCAAGCCCGGAATTCCTAGGTCTTGTCAATGCTCACAAGGAGACTACTGGTTCAGACCAACTTGCTGCAAGTTCTACTTTTTCCAATTCCGAAAAACGTATGCAAGAAGCATTTGTGTTGAAGCAGTTTATAGCACCAAAAGAAGAAAATCAATTGATTAAGCAAGAAGAAAGAGAGAAGGGAGACACAGGATTGAAGCCTTACTTACAATATCTGAATCAGATGAAAGGCTATATATTCTTCTCAATGGCTTCACTTAGTCAGCTGGTTTTTGTAGTTTGTCAGATATTGCAAAACTCGTGGATGGCTTCTAATATTGACAATCCCCTTGTCAGTACATTGCAATTGATTTTAGTTTATTTCATTATTGGTTCTTTTTCAACGGTTTTCGTGTTCACCAGAAGTCTATTTGTAGTAGCTTTGGGTCTTCAATCATCAAAATATTTATCTTCAGAGTTGATGAACTCCCTCTTTCGTGCGCCCATGTCATTTTATGACTCTACACCATTGGGAAGAATACTAAGTAGGGTCTCATCTGATATGAGCATTATGGATCTGGACATTCCGTTTAGCCTTTCTTTTGCTGTGGGAGGAACGATACTTTTTTATTCTAGTATTACGGTTTTGGCAGTTGTCACATGGCAAGTCTTGATTGTGGCTATACCAATGGTTTATGCTGCTATTTACATGCAGCAGAGATACTGTTTTGCCTCAGCGAAAGAAGTAATGCGGATGAATGGCACAACAAAATCTTTATTAGCTAATCATGTAGCTGAAACAGTTGCCGGAGCTGTAACAATAAGGGCTTATGAGGAGGAAGAACGTTATTTTGAGAAGAACCTTGATCTAATTGATATTAATGCTAGTGCTTTTTTCCATAGTTTTGCCTCGAATGAGTGGTTGTTTCTACGATTAGAAACTATAAGTGCGGTTGTTCTCACCGCTGCAGCACTCTGCATGATTATGCTTCCCCCTGGAACATTAAGCTCAGGAATCATTGGCATGGCTCTATCTTATGGCTTTTCGCTAAATGATTCATTAGAATCTTCAATACGAAATCAATGCACTGTTGCGAATTACATAATATCAGTAGAAAGGATAAATCAATATATGCATATACAAAGTGAGGCAGAAGAAATAGTAGAAGGAAATCGTCCTCCTTTGAACTGGCCAACTGCAGGCAAAGTAGAAATAAACGACTTGAAGATACGATACAGGTCTAACGGACCACTTGTACTCGATGGGATCATATGCACATTTATAGCCGGGCATAAGATTGGTATTGTTGGAAGAACAGGCAGTGGGAAATCGACTCTTATCAGTGCTTTATTTCGTCTTGTAGAACCAGCAGGAGGAAAAATTATAGTTGACGGGATAGACATATCATCTATCGGCCTTCATGATTTGAGGTCTAGTTTCGGGGTTATACCTCAAGATCCTACTCTTTTTAATGGGACTATAAGATATAATTTGGACCCTTTATCGAAACATAGTGATCAAGAGATATGGGAGGTTCTCGGGAAGTGTCAGTTGCGACAAGTTATCAAAAGGAAAGAAGAGGGTTTGAACTCCTCAGTGGTTGAAGATGGATCAAACTGGAGCATGGGACAAAGGCAGTTATTCTGTTTGGGGCGCGCTCTTTTAAGAAGAAGTAAGATATTGGTATTGGACGAAGCAACAGCATCGATTGATAATTCTACTGATCTGATTCTGCAGAAAACCATTAGGAACGAGTTTGCAGATTGTACCGTGATCACAGTAGCACACAGGATACCAACTGTGATGGATTGCAGCATGGTTCTCGCTATAAGTGATGGAAAATTGGCGGAGTATGATGAGCCAATGAGGTTGATGAAAAGAGAAGAATCATTGTTTAGAAAGCTTGTCAAGGAGTACTGGTCTCATGCAGAATCATGCTGA 4383 0.3869 MDNILSMICVHCGSGDDDGGKALCYDFKFFKDPSSCINHVLVLCFDLFMLIMLSFIMILKSHSRSFWSTARYSKLQIVSAIANGSLSLLYLCLGISDFAEALPFNQWLQLQELFHGLAWLLVSLSISLEIKQIPRAWMWLFSILMFFVSAILCFLSLSYTFESIESFSLKVALDVMSFPGANLMLLCTYQICKCKDVDSEIDDSLCTPLIDEVIPVTPFAKAGVFSKIWFWWLNPLMKIGQEKTLDDEDIPKLRASDRVKVCYLSFLERLDKKRQEDLSSHSLILWTIILCHQREILLTGFFALLKVLALSSTPLLLSSFISVAEGNESFKYEGYTLVISLLFIKIIESLSQRQWYFRARLVGMKVRSILTAAIYRKVLRLSNSAHSGGEIMNYITVDTCRVGEFPFWFHQTWTTILQLCIALVILFRTIGLATLASLAVIVFTVLCNAPLAKLQHKFQSKLMVAQDERLKATSEALVNMKVLKLYAWEIHFKNVVDYLRNVELKLLYVVQLRRTYLVFLFWTSPMLVSSASFLACYFLKVPLHASNVFTFLATVCLVQEPITRIPDVIAVVIQAKVAFARIVNFLDAPELQSENLKNECLDFSLKGSISIKHADFSWEGNASNPTLRSISLEVRHGQKVAICGEVGSGKSTLLATILGEVPKTKGAIDVNGRFAYVSQAAWIQIGTIRENILFGSKLDDQRYQETLERSSLVKDLELFPYGDLTEIGERGVNLSGGQKQRIQLARALYQNADIYLLDDPFSAVDAHTAKKLINEYIMEGLQGKTVLLVTHQVDFLPAFDSVLLMADGVILQAGPYHQLLNSSPEFLGLVNAHKETTGSDQLAASSTFSNSEKRMQEAFVLKQFIAPKEENQLIKQEEREKGDTGLKPYLQYLNQMKGYIFFSMASLSQLVFVVCQILQNSWMASNIDNPLVSTLQLILVYFIIGSFSTVFVFTRSLFVVALGLQSSKYLSSELMNSLFRAPMSFYDSTPLGRILSRVSSDMSIMDLDIPFSLSFAVGGTILFYSSITVLAVVTWQVLIVAIPMVYAAIYMQQRYCFASAKEVMRMNGTTKSLLANHVAETVAGAVTIRAYEEEERYFEKNLDLIDINASAFFHSFASNEWLFLRLETISAVVLTAAALCMIMLPPGTLSSGIIGMALSYGFSLNDSLESSIRNQCTVANYIISVERINQYMHIQSEAEEIVEGNRPPLNWPTAGKVEINDLKIRYRSNGPLVLDGIICTFIAGHKIGIVGRTGSGKSTLISALFRLVEPAGGKIIVDGIDISSIGLHDLRSSFGVIPQDPTLFNGTIRYNLDPLSKHSDQEIWEVLGKCQLRQVIKRKEEGLNSSVVEDGSNWSMGQRQLFCLGRALLRRSKILVLDEATASIDNSTDLILQKTIRNEFADCTVITVAHRIPTVMDCSMVLAISDGKLAEYDEPMRLMKREESLFRKLVKEYWSHAESC 1460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi77g00008 1460 SMART AAA_5 636 809 IPR003593 GO:0016887
Vivi77g00008 1460 SMART AAA_5 1243 1435 IPR003593 GO:0016887
Vivi77g00008 1460 CDD ABC_6TM_ABCC_D2 898 1192 IPR044726 GO:0140359
Vivi77g00008 1460 CDD ABC_6TM_ABCC_D1 323 582 IPR044746 GO:0140359
Vivi77g00008 1460 Gene3D ABC transporter type 1, transmembrane domain 284 585 IPR036640 GO:0005524|GO:0016020
Vivi77g00008 1460 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1217 1451 IPR003439 GO:0005524
Vivi77g00008 1460 ProSitePatterns ABC transporters family signature. 734 748 IPR017871 GO:0005524|GO:0016887
Vivi77g00008 1460 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 297 574 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vivi77g00008 1460 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 905 1180 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vivi77g00008 1460 FunFam ABC transporter C family member 5 598 840 - -
Vivi77g00008 1460 CDD ABCC_MRP_domain2 1215 1435 - -
Vivi77g00008 1460 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 603 832 IPR027417 -
Vivi77g00008 1460 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 611 832 IPR003439 GO:0005524
Vivi77g00008 1460 Gene3D - 1201 1452 IPR027417 -
Vivi77g00008 1460 Pfam ABC transporter 1235 1382 IPR003439 GO:0005524
Vivi77g00008 1460 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 220 1451 - -
Vivi77g00008 1460 FunFam ABC transporter C family member 3 1200 1452 - -
Vivi77g00008 1460 FunFam ABC transporter C family member 5 865 1198 - -
Vivi77g00008 1460 Gene3D ABC transporter type 1, transmembrane domain 864 1199 IPR036640 GO:0005524|GO:0016020
Vivi77g00008 1460 CDD ABCC_MRP_domain1 609 808 - -
Vivi77g00008 1460 FunFam ABC transporter C family member 10 280 590 - -
Vivi77g00008 1460 Pfam ABC transporter 627 761 IPR003439 GO:0005524
Vivi77g00008 1460 Gene3D - 586 858 IPR027417 -
Vivi77g00008 1460 SUPERFAMILY ABC transporter transmembrane region 889 1199 IPR036640 GO:0005524|GO:0016020
Vivi77g00008 1460 SUPERFAMILY ABC transporter transmembrane region 285 590 IPR036640 GO:0005524|GO:0016020
Vivi77g00008 1460 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1207 1450 IPR027417 -
Vivi77g00008 1460 Pfam ABC transporter transmembrane region 297 540 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vivi77g00008 1460 Pfam ABC transporter transmembrane region 907 1160 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi77g00008 589 852 Calmodulin-binding Proteins AT2G36910 29.371 6.95e-25 111