Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vivi77g00004 | ATGGAGAAGAAAGCAGTAGCTGCCTTGTCCTTCCTCTTCCTCGTTCTCTTTGTTGCACAAGAAATTGCAGTGATTGAGGCAAAAACTTGTGAGAATTTGTCCGCCAAATACAAGGGACCATGCTTCACAAATGGAAGCTGTGACGATCATTGCAAAAACAAAGAGAAGGTAGTTAGTGGCAGGTGCAGGGATGATTTTCGCTGCTGGTGCACTTATAAAAACTGTTGA | 228 | 0.4342 | MEKKAVAALSFLFLVLFVAQEIAVIEAKTCENLSAKYKGPCFTNGSCDDHCKNKEKVVSGRCRDDFRCWCTYKNC | 75 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vivi77g00004 | 75 | SUPERFAMILY | Scorpion toxin-like | 27 | 72 | IPR036574 | - | |
| Vivi77g00004 | 75 | PANTHER | DEFENSIN-LIKE PROTEIN 1 | 1 | 71 | - | - | |
| Vivi77g00004 | 75 | CDD | Knot1 | 39 | 71 | IPR003614 | GO:0006952 | |
| Vivi77g00004 | 75 | Gene3D | - | 28 | 75 | IPR036574 | - | |
| Vivi77g00004 | 75 | Pfam | Gamma-thionin family | 28 | 75 | - | - | |
| Vivi77g00004 | 75 | SMART | gth_4 | 29 | 75 | IPR003614 | GO:0006952 | |
| Vivi77g00004 | 75 | ProSitePatterns | Gamma-thionins family signature. | 28 | 51 | IPR008176 | GO:0006952 |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Vivi77g00004 | 1 | 71 | Plant Defensins Gene Families | AT5G63660 | 44.444 | 1.19e-10 | 50.4 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vivi77g00004 | - | K06233 | gmx:100779239 | 119.012 |