Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi776g00003 ATGGAAGCAAAAGGTGGTGGAGAAGTTAGAAGGCTTCACATAATCTATTTTCTTAGTCATACAGGTGGTCATGCAGAACATCCTCATCTCATTCGAGTTCTTCATCTCGCTCGAAATGGTGTTTTTCTCCGAGATATTAAGAGGTGGCTAGGTGAATTGAGGGGAAAGGACTTACCTGAATCATATGCTTGGTCCTACAAAAGGAGGTACAAGAGTGGATATGTGTGGCAGGATTTAATGGATGACGACCTCATAACCCCCATTTCTGATAATGAATACGTCCTCAAAGGATCACAAATCCACACTACCCCTTTTGAAGCTCTTTCAATAAACTCAATCAATGAAAAGAAGAATGATGCTGATATAGCTGTACAAGTTGAAGAGGACAAACAAAAGCAGCAAAAGAAACCATCTTTGTCGGAAGAAGAATCTGAAATTCAGCAAGAAACTGATACAAGAAAGAATAATCTAAATCATGTGTCATCAGAAATAAGTCAGGACTCATTGGTTTTCAGCTCGGACAGGTCGTCGATGACCGACGATGATTCGTCTTCTAAAGTTGAAGAAGAGAAGCTTTTAGGGAATGGTAAAGAAAGTAGTTTGAGTGAAAAGAATCATGACAAGTTTGAGAGTTTCACATTTCCTTCTTTGTATCATAATTTGATGAGTAAGAAGGGTAAAAAAGATGGACATAATAACAAAACTGATACTACTACTACTACACCTCCTGATTCGACTTTGTCTACTCCAACTTCGTCGACGTCGTCTCAATCGTCTTTTACTAGGATCAGAAGTAATTCTACTAGAGTTTCTAGTGTGTTCAGAAATTTGATTGGTTGTGGAACTGTGGCAACAAATGATGCTGCTTTTGCTCCGAAAATTCTCCCTAAAGAAACTAACAATGTGCTTGGAAAAAGGGGTGAGATTTGTAGAGGAGACAAATTGGGAGGATCAGCTAGATGTTTTAGTACTCCTTGGAATTGCTATGATCATAATGGCCATTATGAAGCCAGAAAAAGCTGTGATGGAGGGGAAATAAGCAAGGGCAGGAAAAAGCTAAGCGAGCTAATGAGTCAAACTTCTCATAAACCATTTGGGGGACCAGTTTGCTCGCAATGTGGGAAATCATTCAAGCCTGAGAAAATGCACAAACACATGAAGTCTTGTAAAGGAATGAAAGGCATGGGAACTTCAACTGTTGCTGAAGAAACACAACATAAGAGATCAACTTCATCTTGTAAAGATTACCTTTTGCAAAATTAA 1263 0.3888 MEAKGGGEVRRLHIIYFLSHTGGHAEHPHLIRVLHLARNGVFLRDIKRWLGELRGKDLPESYAWSYKRRYKSGYVWQDLMDDDLITPISDNEYVLKGSQIHTTPFEALSINSINEKKNDADIAVQVEEDKQKQQKKPSLSEEESEIQQETDTRKNNLNHVSSEISQDSLVFSSDRSSMTDDDSSSKVEEEKLLGNGKESSLSEKNHDKFESFTFPSLYHNLMSKKGKKDGHNNKTDTTTTTPPDSTLSTPTSSTSSQSSFTRIRSNSTRVSSVFRNLIGCGTVATNDAAFAPKILPKETNNVLGKRGEICRGDKLGGSARCFSTPWNCYDHNGHYEARKSCDGGEISKGRKKLSELMSQTSHKPFGGPVCSQCGKSFKPEKMHKHMKSCKGMKGMGTSTVAEETQHKRSTSSCKDYLLQN 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi776g00003 420 MobiDBLite consensus disorder prediction 128 206 - -
Vivi776g00003 420 MobiDBLite consensus disorder prediction 179 206 - -
Vivi776g00003 420 Pfam Protein SOSEKI, plant 13 288 IPR010369 -
Vivi776g00003 420 MobiDBLite consensus disorder prediction 398 420 - -
Vivi776g00003 420 MobiDBLite consensus disorder prediction 223 265 - -
Vivi776g00003 420 MobiDBLite consensus disorder prediction 153 178 - -
Vivi776g00003 420 MobiDBLite consensus disorder prediction 388 420 - -
Vivi776g00003 420 MobiDBLite consensus disorder prediction 235 265 - -
Vivi776g00003 420 PANTHER UPSTREAM OF FLC PROTEIN (DUF966) 5 411 IPR010369 -
Vivi776g00003 420 MobiDBLite consensus disorder prediction 128 152 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Vivi776g00003 DUF966 3.5e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi776g00003 - - aprc:113855595 482.256