Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi775g00005 ATGGCTTCATCCTCCCTTGTTCTGTTATTATTACTTTTCTTGTTGATGCTAATTACAACAGATGCTAGAAACACAATTGAGAAAAATAACTCCAGTATCTTTAGGTTGGGGTCTTCACTCTCTCCTCAAGGCAAAAACAGTTCATGGTCATCAAGTTCTGGCCACTTTTCATTCGGGTTTTACCCACAAGGTAGTGACTTTGCTGTTGGGATATGGTTGGTTAATCCATCTGAAAATACAACCACTGTTGTGTGGACTGCTAACCGAGATGATCCACCAGTCTCCTCTAAATCTATGTTGAATTTGACAGAGCATGGTCTGCTTCTTCAAAATGGAAACGGAGACTCACCTAAAAAATTAGACTCAGGAGATTCATATATAGTCTCATGGGCATCTATGCTTGATTCTGGAAACTTTGTGCTTTATGATGAGCATTCAAATGTTATCTGGCAAAGCTTTGATTACCCAACAGACACCATATTAGGAGGTCAGAAACTGACTATGGGTCATGCTTTAATCTCTAGTATTTCCAAATCAGACCATTCCCCTGGAAATTTCTATCTCACCATGCAAGATGATGGAAACCTTGTTGCTTATCCTTTTTATAGCGGAGTTAGCGAGCGCGATGCTTACTGGGCTTCAAACACTCTGTATGAGATATACCAACAACTCAGTCTTAACATTCAAGGCTTTCTTTGTCTTGAATCAGTTTCTGATCCTACTAGTACGTTGTGTTTCAACAATGGCAACGAGCAAACAACAAGGAAGTCACACAACAACACAACTTCAATCTACCGTGCAACACTAGACGTAGATGGAAACCTGAGATTGTATGAGCACCAATTTCACTTTGAGGGCAACAATAGCTCTCGTGTGGTAACGTTGTGGCACGCACTCAATAGTACATGTCAAGTGTATGGGTTTTGTGGGCTGAACAGTTATTGCTCTTCTAACATTAGTGGTGCTGATGTTGCCTGCAAGTGCTATCATGGTTTCACCCCGTCTAATACTAAAAGCAGTCCAAACACGCCTATAGACTGCGTCCAGATGAATAACAAAGATGATTGTGAAAGAAGTGAAGGCCTGAGGTTGTTGTATAATTTTACTCAGATTAAGAATTTGTTTTGGGGCGGTATTCCTTATTCTGTCATACCCTTGGTCGACATGGAAACTTGTGAAAAGGCTTGCCAACAGGATTGTTTTTGTGGGGGAGCACTATATGTAACTATATACAGCAGTTGCAGTAAATATAGGCTTCCGCTTATTTATGGCAATATCCGAAATTATTCTATCACTGAGTCTGTGGCCCTAATAAAGTTTCCTTCTTCAATAATTAGTATTTCACCTCAGACCTCAAACGACACCAACACGCCTAAGCTCAAGTTTGTTGTTGACAACAAGAAAAATCTGATAATGATTCTTAGTCTTACTTTGGGTGTCGTTTCATTGATTTGTTTGATCATGGCGGTGTCCATTTTCTTCACTTACAGGCGTCAAGTTAATAGGTATGCAATGTTGTCTGAAAGTGAAAAACTTGATTTTACTAAAGAATGTTCCTTGCGATCATTTTCTTTTGATGAACTTGCAAAATCAACCGGGGAATTTTCAGAAGAGATAGGGAGAGGGTCATTTGGAACTGTTTATAAAGGTAAAATAGGCGACAATAACAGAAGTATTGCTGTGAAGAGACTGGAGGAGAGAATTGCCGATGAAGGTGTAAGGGAATTCCAAGCTGAAATTACGGCCATTGCTCGAACTCATCACAGGAATTTAGTTAAGCTTATTGGTTTCTGCATAGAAGGATCTAAGAAGCTCCTTGTTTATGAATTTGTCAGCAAAGGGTCTCTTGCAAATCTCCTCTTTGAACGGGAAGCAGGACTATCTTGGAAAGAGAGAATTAAACTTGCATTAGATGTAGCTAGAGGACTACTGTATCTACACGAAGAATGTGAAGTCCAAATCATCCATTGCAATATAAATCCTCGAAATATACTTATGGATGAATCGTGGACTGCAAAAATATCTGATTTTGGATTGGCAAGACTATCAAAGAGGGGCAATTCAAGAACTAAAATTGGGGATGATGGCAGAAGCAGGTACTTGGCACCTGAATGGCAACAAGAGGTTGCATCAGTATCAGTAAAAGCTGACATTTACAGTTTTGGAGTGATATTGTTGGAGATTATCTGCCGCAGAAGAAGTATAGAGATGAATGATATTTCCTCATCTGATGAAATCCTTCTCTCTAACTGGGTATATCAATGTTATGCAGCAGAGAAGTTAAACGAGCTTATCCGACATGATGAAAAAGATGTGGATTGGAAAATATTGGAAAGAATGGTGAAAGTAGGGCTGTGGTGTGTGCAAGACCACCAATCTCTCCGTCCTACAATGAAGAATGTAATACTGATGCTAGAAGGTTTGAAAGACATTCCAGTTCCTCCAGCTCCATCTGGCTCAGTTGGATAG 2469 0.3977 MASSSLVLLLLLFLLMLITTDARNTIEKNNSSIFRLGSSLSPQGKNSSWSSSSGHFSFGFYPQGSDFAVGIWLVNPSENTTTVVWTANRDDPPVSSKSMLNLTEHGLLLQNGNGDSPKKLDSGDSYIVSWASMLDSGNFVLYDEHSNVIWQSFDYPTDTILGGQKLTMGHALISSISKSDHSPGNFYLTMQDDGNLVAYPFYSGVSERDAYWASNTLYEIYQQLSLNIQGFLCLESVSDPTSTLCFNNGNEQTTRKSHNNTTSIYRATLDVDGNLRLYEHQFHFEGNNSSRVVTLWHALNSTCQVYGFCGLNSYCSSNISGADVACKCYHGFTPSNTKSSPNTPIDCVQMNNKDDCERSEGLRLLYNFTQIKNLFWGGIPYSVIPLVDMETCEKACQQDCFCGGALYVTIYSSCSKYRLPLIYGNIRNYSITESVALIKFPSSIISISPQTSNDTNTPKLKFVVDNKKNLIMILSLTLGVVSLICLIMAVSIFFTYRRQVNRYAMLSESEKLDFTKECSLRSFSFDELAKSTGEFSEEIGRGSFGTVYKGKIGDNNRSIAVKRLEERIADEGVREFQAEITAIARTHHRNLVKLIGFCIEGSKKLLVYEFVSKGSLANLLFEREAGLSWKERIKLALDVARGLLYLHEECEVQIIHCNINPRNILMDESWTAKISDFGLARLSKRGNSRTKIGDDGRSRYLAPEWQQEVASVSVKADIYSFGVILLEIICRRRSIEMNDISSSDEILLSNWVYQCYAAEKLNELIRHDEKDVDWKILERMVKVGLWCVQDHQSLRPTMKNVILMLEGLKDIPVPPAPSGSVG 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi775g00005 822 Gene3D - 157 306 - -
Vivi775g00005 822 FunFam Putative receptor-like protein kinase 611 813 - -
Vivi775g00005 822 Pfam D-mannose binding lectin 82 168 IPR001480 -
Vivi775g00005 822 ProSiteProfiles Bulb-type lectin domain profile. 31 154 IPR001480 -
Vivi775g00005 822 SUPERFAMILY alpha-D-mannose-specific plant lectins 82 217 IPR036426 -
Vivi775g00005 822 Gene3D - 31 154 IPR036426 -
Vivi775g00005 822 PIRSF SRK 2 821 IPR024171 GO:0004674
Vivi775g00005 822 ProSitePatterns Protein kinases ATP-binding region signature. 539 562 IPR017441 GO:0005524
Vivi775g00005 822 Gene3D Phosphorylase Kinase; domain 1 497 610 - -
Vivi775g00005 822 FunFam Serine/threonine-protein kinase 156 290 - -
Vivi775g00005 822 Gene3D Transferase(Phosphotransferase) domain 1 611 811 - -
Vivi775g00005 822 ProSiteProfiles Protein kinase domain profile. 533 808 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi775g00005 822 Pfam Protein tyrosine and serine/threonine kinase 535 802 IPR001245 GO:0004672|GO:0006468
Vivi775g00005 822 FunFam S-receptor-like serine/threonine-protein kinase 503 610 - -
Vivi775g00005 822 ProSiteProfiles Bulb-type lectin domain profile. 157 290 IPR001480 -
Vivi775g00005 822 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 40 815 - -
Vivi775g00005 822 SUPERFAMILY Protein kinase-like (PK-like) 517 806 IPR011009 -
Vivi775g00005 822 Pfam S-locus glycoprotein domain 242 335 IPR000858 GO:0048544
Vivi775g00005 822 SMART blect_4 40 156 IPR001480 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi775g00005 444 817 Receptor kinase-like Gene Family AT4G18250 37.047 4.57e-64 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Vivi775g00005 PK_Tyr_Ser-Thr 9.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi775g00005 - - cam:101496142 1167.14