Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi775g00004 ATGGCTCGTCCGATGGAAAAAATTACGGACATCAACGACACCAAGGAGTTGTGGAAAGTGGCGGTGAGAGTTGCCCATAAATGGAAGGTAGTCACCAACAACAAGGAGCACTTTGAGATGATCTTCCAAGACAAAGAGGGCTGTGATATCCACGTGGTTGTTCCAACTGCATGCATGGCCGCATACAATGAGAAGTTTGAGGTGGACCGCACGTATACTGTGTCAAATTTTGCGGTGCAGCCTAATAACTTAGTTTTCAAACCAAGCTCCCACAAGTTCTTGGTGAAATTTACTGGAGGAACTGTTGTTGGTGATGTTGACAAACATGACATACCCCCCAAACCACGCCCCTTCACCAGTTTCCCTGACATCATTAACGGAAACTATCAGAAGAATGTACTCATTGATGTTATTGGTATGCTCGAGAGTGTTGGGTATCAACAGACGTAA 450 0.4511 MARPMEKITDINDTKELWKVAVRVAHKWKVVTNNKEHFEMIFQDKEGCDIHVVVPTACMAAYNEKFEVDRTYTVSNFAVQPNNLVFKPSSHKFLVKFTGGTVVGDVDKHDIPPKPRPFTSFPDIINGNYQKNVLIDVIGMLESVGYQQT 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi775g00004 149 Pfam Domain of unknown function DUF223 39 134 IPR003871 -
Vivi775g00004 149 CDD RPA1_DBD_A_like 19 103 - -
Vivi775g00004 149 Gene3D - 3 105 IPR012340 -
Vivi775g00004 149 SUPERFAMILY Nucleic acid-binding proteins 5 103 IPR012340 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi775g00004 1 144 Core DNA Replication Machinery Family AT5G08020 24.503 9.39e-07 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi775g00004 - - vvo:131636288 311.612