Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi769g00002 ATGGAAAATGTTTCAGTTATGTATAAGGAAGAAGATCAAATGAATTTGCCACCTGGGTTTAGGTTTCATCCAACTGATGAAGAGCTTATAAGTCATTATCTTTATAGAAAGGTAACTGACTTTAATTTTTCTTCTAGTGCTATTGGAGAGGTTGATTTGAACAAATTTGAGCCTTGGGATTTGCCATGGAAAGCAAAAATGGGTGAAAAGGAGTGGTATTTTTTCTGTGTGAGAGATAGAAAGTATCCAACAGGTTTGAGGACTAATAGAGCGACTGGAGGTGGATATTGGAAGGCAACTGGAAAAGATAAGGAGATTGACAGAGGAAAATCTCTTGTTGGAATGAAGAAAACTCTTGTTTTCTACAAAGGAAGAGCACCTAAAGGGGAAAAGACGAATTGGGTCATGCATGAATATAGACTTGAGGGTAAATTATCTGTTATCAACCTCCCTAAAACTGCAAAGAATGAATGGGTGATTTGCAGAATATTTCAGAAGAGTCTATCTGACAAAAAGACATGTGATCTTTCTTCTGGGATAATGAGGTTAGAATCTTTTCGAAATGAAATGAATTCTTCTATTCTTCCACCTTATTCCAATAACAAAATCGGTTCGCCTTACGTGTCCTGCTTCTCCAATCCAATTGAAAGAAACCAAGTTACAACCTTTGATTCCTTTACCAACAACCCTTTTGAGGTTCCAAAAAACACACTTTCCATTGGTTCATTTTACTCTACTCAAGAACTTCAAACTACATCAAATTTTCCATTACATGGTTCTGTTTCAACTGCACCAATTGATCTATCTACCTTGTGGAACTATTAA 825 0.3612 MENVSVMYKEEDQMNLPPGFRFHPTDEELISHYLYRKVTDFNFSSSAIGEVDLNKFEPWDLPWKAKMGEKEWYFFCVRDRKYPTGLRTNRATGGGYWKATGKDKEIDRGKSLVGMKKTLVFYKGRAPKGEKTNWVMHEYRLEGKLSVINLPKTAKNEWVICRIFQKSLSDKKTCDLSSGIMRLESFRNEMNSSILPPYSNNKIGSPYVSCFSNPIERNQVTTFDSFTNNPFEVPKNTLSIGSFYSTQELQTTSNFPLHGSVSTAPIDLSTLWNY 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi769g00002 274 ProSiteProfiles NAC domain profile. 16 166 IPR003441 GO:0003677|GO:0006355
Vivi769g00002 274 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 15 217 - -
Vivi769g00002 274 Pfam No apical meristem (NAM) protein 17 141 IPR003441 GO:0003677|GO:0006355
Vivi769g00002 274 SUPERFAMILY NAC domain 11 166 IPR036093 GO:0003677|GO:0006355
Vivi769g00002 274 Gene3D NAC domain 25 169 IPR036093 GO:0003677|GO:0006355
Vivi769g00002 274 FunFam NAC domain-containing protein 100-like 25 170 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi769g00002 14 249 NAC Transcription Factor Family AT5G07680 63.786 3.38e-103 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Vivi769g00002 NAM 2.9e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi769g00002 - - vvo:131634573 553.132