Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi767g00007 ATGGATCTTTCCGAAACCTCACTCTGGTGGACACAACAACAACATCATCAACACCAACAACAACCTATGATGTTACTAGAACCAATCCAAACCACTTCATGGCCACTCCACCACCACCAACCTCCATGGCTCACTTCACAAACCCATGAAAACGACGAAGAAGAACAAGAAAACGACACGACCGTTGCAAAACTCCCCGAAGACGAAAAGGAACCAATGTTCGAGAAACCCTTAACACCAAGCGACGTAGGGAAACTCAACCGTCTGGTCATCCCAAAGCAATACGCAGAAAGATACTTCCCACTCGGCGGTGGTGGCGCTGAGTCGAACGAGTGCAAGGGCTTGTTACTGAGTTTCGAGGACGAGTCGGGGAAGAGCTGGCGGTTCCGTTACTCGTATTGGAACAGCAGTCAAAGCTACGTGTTGACTAAGGGTTGGAGTCGTTATGTGAAAGATAAGCGTTTAGATGCTGGCGACGTCGTTTTGTTTGAACGACACCGTGTTGATAGTCAGAGGCTTTTTATTAACTGGAGGAGGAGGAATGGGAATGATGAGTCGGCGTATGTTAGCAGAGGGGTGGGACAGCATGGGAAAGGGAGTGATAAGAATGAGGTTGTGGGTGTTGGGTGGTCCAGAGGATTCTATTCTGCGCACTTGCCTTATCCTGCGCATCATCTTCATCAGCATCAGCAGGTTTTGCCATACCAACATGATCATTGTCTTCATGCAGGTAGAGTATCCCAAGGACAGAACCAAAGGACGAAACCGGTAGGAAACAGTTCAAGTTCAAGGGTACTTAGGTTGTTTGGTGTCAACATGGAATGCCAACCTCAACATGAACATGAACATGATTCTTCTTCAACACCTCAATGTTCTTATGATAGTAATAACAATGATAATAATGTGCCATTAACACCATATCGTCAACCTAATACTTCTAATTCTAACCCTCACGTGGTACGTCACCAACCATATTATTACTAG 984 0.4604 MDLSETSLWWTQQQHHQHQQQPMMLLEPIQTTSWPLHHHQPPWLTSQTHENDEEEQENDTTVAKLPEDEKEPMFEKPLTPSDVGKLNRLVIPKQYAERYFPLGGGGAESNECKGLLLSFEDESGKSWRFRYSYWNSSQSYVLTKGWSRYVKDKRLDAGDVVLFERHRVDSQRLFINWRRRNGNDESAYVSRGVGQHGKGSDKNEVVGVGWSRGFYSAHLPYPAHHLHQHQQVLPYQHDHCLHAGRVSQGQNQRTKPVGNSSSSRVLRLFGVNMECQPQHEHEHDSSSTPQCSYDSNNNDNNVPLTPYRQPNTSNSNPHVVRHQPYYY 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi767g00007 327 MobiDBLite consensus disorder prediction 58 76 - -
Vivi767g00007 327 MobiDBLite consensus disorder prediction 288 320 - -
Vivi767g00007 327 Gene3D - 64 191 IPR015300 -
Vivi767g00007 327 CDD B3_DNA 72 171 IPR003340 GO:0003677
Vivi767g00007 327 MobiDBLite consensus disorder prediction 36 79 - -
Vivi767g00007 327 SUPERFAMILY DNA-binding pseudobarrel domain 69 181 IPR015300 -
Vivi767g00007 327 SMART B3_2 74 181 IPR003340 GO:0003677
Vivi767g00007 327 MobiDBLite consensus disorder prediction 276 327 - -
Vivi767g00007 327 Pfam B3 DNA binding domain 74 181 IPR003340 GO:0003677
Vivi767g00007 327 ProSiteProfiles B3 DNA-binding domain profile. 74 181 IPR003340 GO:0003677
Vivi767g00007 327 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 14 287 IPR044800 GO:0003700
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi767g00007 37 285 RAV Transcription Factor Family AT5G06250 48.828 6.37e-64 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Vivi767g00007 B3 1.2e-30 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi767g00007 K09287 - gmx:100795470 376.711