Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi75g00045 ATGTTTTGTGGGAAATTTTCTTCAACTGGGTATGATGATTTGGAGCTGTTGAGTCACTCTTTGCATGAGATTGGAGGTTCTGATGGTGTTTCGAGAGATGGGTTGTTGTTGTCATCGTTGACAGAAAGGGTTGGTGGTAAGAATGAGAATTGTGAGGCGAAAGCTTTGGCTGCTTTGAAGAATCATAGTGAAGCGGAGAGGAGAAGGAGGGAGAGAATAAATGGTCATCTTGCTACATTACGTGGTCTTGTGCCTTCTACTCATCAAAAGATGGACAGAGCCACATTACTTGCTAAAGTGATCAGCCAAGTGAAGGAATTAAAGAATCATGCAATGGAAGCAAGCAAAGGTTTTCTAATTCCAATGGAAACCGATGAAGTGAAAGTTGAACCATATGATACTAAACTAGGATATGGATGCATGTCTTACATGGCAACTATATGCTGTGATTACCAACCTGAGATACTTTCTGACCTTAAAAAAACACTTGATGCACTTCAACTTCAACTAGTGAAGTCAGAGATGTCAACATTGGAAAGTAGAATGAAGAATGTGTTTGTATTCACATGTTGCAAAGGGCATAATAATAGTGTTAATGTTGAAGCTTGTCAAAGTATTGCAAATGTTGTTCATAAGGCACTTGGTTCTGTGTTGGAAAAGGCTTCTATGTCAATGGAATTTGCACTTAGAACTTCGTATCCAAACAAGAGGAGAAGAATATGTTGA 726 0.3884 MFCGKFSSTGYDDLELLSHSLHEIGGSDGVSRDGLLLSSLTERVGGKNENCEAKALAALKNHSEAERRRRERINGHLATLRGLVPSTHQKMDRATLLAKVISQVKELKNHAMEASKGFLIPMETDEVKVEPYDTKLGYGCMSYMATICCDYQPEILSDLKKTLDALQLQLVKSEMSTLESRMKNVFVFTCCKGHNNSVNVEACQSIANVVHKALGSVLEKASMSMEFALRTSYPNKRRRIC 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi75g00045 241 PANTHER TRANSCRIPTION FACTOR BHLH30 47 240 IPR045847 GO:0003700|GO:0006355
Vivi75g00045 241 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 60 110 IPR036638 GO:0046983
Vivi75g00045 241 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 57 107 IPR011598 GO:0046983
Vivi75g00045 241 Gene3D - 54 116 IPR036638 GO:0046983
Vivi75g00045 241 Coils Coil 156 176 - -
Vivi75g00045 241 Pfam Helix-loop-helix DNA-binding domain 61 107 IPR011598 GO:0046983
Vivi75g00045 241 SMART finulus 63 113 IPR011598 GO:0046983
Vivi75g00045 241 Coils Coil 48 68 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi75g00045 54 220 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G40200 37.791 1.20e-28 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Vivi75g00045 HLH 5.4e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi75g00045 - - psat:127107084 402.905