Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi75g00042 ATGTCGTCCACAACAATGTTCTTTACCATACTCACCATTCTCTTGTTTTTGTTTTCGTTTTCTTCACGTGCTTCTTCTTACAACCACCACCACCACCACCGTCGTATCCTCCACCAACCACTTTATCCTTCTATCTCTCTTCCACCTACACAACCACCGTCTTCTTCACCTCAAACCCAACCCCAACCGCAACAACCTAAGCTTCCATTTTCTTCCATTTCTTCATCTTATCCTCCTCCACTAAAGCCTTTCTTCCCTACTTATCAACCTCCACCACTCCCTCCTTCTCCTCCATCTGTACTCGCCACTTTTCCAGCCAACATCTCCTCCTTACTCCTCCCACAGCCCCACCCTCAAACCCACACCCACCGCACCGCTGCTGCCGTCGTTATCTCCCTCTGTCTCTTCTCCATCACCATCCTCACCGTATCTGCCATCTTCGCCTTCCACCGTCGCCATCTCAACCACACTTCCTCCTTCACCACCGCAAACGATGATAACGCTTCCAGGTCAGATAGTCTCCGTTTATTTCCACCAAACACCGCCACTTCAGATGCCGTCGACGGGAAGCCTCACGACAAACCAACCTCCGGGTCTGAGATATTCCACCTCGGTACAGTAGCAAGTTCATACGACGCAAGAGTTACCGAAGAATCAACCTCTGGTAATGACAACGACGGTTTCTCGCCGCCGTACCGGCAACTCACAGACTCCCCGGAGCTTCGTCCTTTACCTCGTCTACCACGTTACAATGGCAAAACATGGTCGACTGAACTGAACAAAGAAGAAGACAAAAAAAGAGAAGATGAAGAAGATGAACAGTTTTATTCTCCGAAAGATTCTCCTGGAAACAACAAACAACAGAGTCCTCCTCCTTCATCTTCTTCACCTGTCGTTACTGTTGCTGTTGCTGCAACAAGCTCTCGTTCATTCAACGTTTTTCATTTTGATAAATTTGGTAGCAGAAGCTTCACTTCAAGAACACCCTCTTACCCTCTTTCTTACTCACTTTCTCGTTCTCCTTCTCTCAATCTTAGTCCTATCCATAGCGGGAAATCTTTACCTCCTCACAACCCTGCATCTCCTTCTTTTTCTTCTTCCTCTTGTTCTCCAATCCGGTTCGAAGATTTTCGTTCGAATTGGGATGGTAAGAACTCTCAGACAACCAAACTGTCTCCTCCTGCTCCGCCGCCTATGCCGCGGAGTTTTTGGGAGACTCCGGCGGTGGCTTCTGAAAATGTTAATGATGAATCTCGAAAGCCGAAGTTGAAGGCTTTACATTGGGATAAAGTTAAGGCAAGCTCAGATAGGGCCATGGTTTGGGATCAGTTGAGACCAAGTTCTTTTCAGTTGAATGAGGACATGATTGAGACACTCTTTATGATAAATAATTCCAATGGAAATTCTGCTTTGGCTTCTAAAGACAAAGCGCGAAATCAAATAATCCATTCTTCTCCTGTGCCGCCGGAGAATAGGGTGCTTGATCCTAAGAAGTCTCAGAATATAGCCATTTTGCTTCGGGCACTGAATGTAACTGTTGATGAAGTTTGTGAAGCTCTCAGGGAAGGAAATTGTGATACATTGGGAACAGAACTTCTAGAAAGTTTATTAAAGATGGCTCCAACCAAAGAGGAAGAAACTAAGCTGAAGGAGTTTAAAGATGATTCACCCTTCAAGCTTGGCCCAGCTGAGAAATTTCTTAAAGTCATGCTTGATATACCTTTTGCATTCAAGAGAGTAGATGCTATGCTTTACATTGCTAATTTTGATTCCGAATTAGATTACCTTAAGAAATCCTTTCATACTCTGGAGGTGGCTTGCGAGGAATTGAAGAATAGCAGGATGTTCATGAAGATACTTGAGGCAGTTCTGAGAACTGGAAATCGTATGAATGTTGGCACCGATCGTGGTGACGCACAAGCATTCAAACTGGACACACTTTTGAAGTTAGTTGATATTAAGGGAACTGACAAAAAGACTACTCTTTTACATTTCGTTGTGCACGAGATTGTCAGAACCGAGGGTTCTCATGCTGACTCTGTCAACAACCATCAATATACACTTCAAGATGAGGTCGACTCCAGGAAGCTTGGACTGCAAGTTGTATCGGGTTTGAGCGGGGAGCTCGCCAACGTTAAAAAGGCAGCTGTTATGGATTCAGACACGCTGAGCAATGATGTTGCTAAGCTTGCCAAAGGAATCGAAAAGGTTGTGCGAGTTGTAAAATTGAATGAAGAGTCACCTTTGAAAGAAACTAACCAAAAATTTTCTGAGGCAGTGAAAGGCTTCTTGGAGAGGGGGGAAGCAGAAATTTCAAGGATCACGGCACAAGAGAAAAATGCTCTCGCATTAGTGAAGGAGATAACTGAGTATTTCCATGGTAATTCGGAAAAGGAAGAAGCTCATCCGTTTAGGATATTTACGGTTGTAAAGGATTTCCTCTCGATACTAGACAGTGTCTGCAGGCAAGTTGGGAAAGCAAATGAGAGGACTTTGGTCGGTTCACATCAATGTGTAACGCCTGCAATCACTACACTTCCACCAATTTTCCCTGAGTTTAGTGATATGCAGCCATCCGATTCCTCAGAATCTGATTAG 2598 0.4469 MSSTTMFFTILTILLFLFSFSSRASSYNHHHHHRRILHQPLYPSISLPPTQPPSSSPQTQPQPQQPKLPFSSISSSYPPPLKPFFPTYQPPPLPPSPPSVLATFPANISSLLLPQPHPQTHTHRTAAAVVISLCLFSITILTVSAIFAFHRRHLNHTSSFTTANDDNASRSDSLRLFPPNTATSDAVDGKPHDKPTSGSEIFHLGTVASSYDARVTEESTSGNDNDGFSPPYRQLTDSPELRPLPRLPRYNGKTWSTELNKEEDKKREDEEDEQFYSPKDSPGNNKQQSPPPSSSSPVVTVAVAATSSRSFNVFHFDKFGSRSFTSRTPSYPLSYSLSRSPSLNLSPIHSGKSLPPHNPASPSFSSSSCSPIRFEDFRSNWDGKNSQTTKLSPPAPPPMPRSFWETPAVASENVNDESRKPKLKALHWDKVKASSDRAMVWDQLRPSSFQLNEDMIETLFMINNSNGNSALASKDKARNQIIHSSPVPPENRVLDPKKSQNIAILLRALNVTVDEVCEALREGNCDTLGTELLESLLKMAPTKEEETKLKEFKDDSPFKLGPAEKFLKVMLDIPFAFKRVDAMLYIANFDSELDYLKKSFHTLEVACEELKNSRMFMKILEAVLRTGNRMNVGTDRGDAQAFKLDTLLKLVDIKGTDKKTTLLHFVVHEIVRTEGSHADSVNNHQYTLQDEVDSRKLGLQVVSGLSGELANVKKAAVMDSDTLSNDVAKLAKGIEKVVRVVKLNEESPLKETNQKFSEAVKGFLERGEAEISRITAQEKNALALVKEITEYFHGNSEKEEAHPFRIFTVVKDFLSILDSVCRQVGKANERTLVGSHQCVTPAITTLPPIFPEFSDMQPSDSSESD 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi75g00042 865 SUPERFAMILY Formin homology 2 domain (FH2 domain) 393 830 - -
Vivi75g00042 865 MobiDBLite consensus disorder prediction 278 299 - -
Vivi75g00042 865 MobiDBLite consensus disorder prediction 347 400 - -
Vivi75g00042 865 Gene3D Formin, FH2 domain 421 833 IPR042201 -
Vivi75g00042 865 MobiDBLite consensus disorder prediction 47 72 - -
Vivi75g00042 865 MobiDBLite consensus disorder prediction 212 232 - -
Vivi75g00042 865 MobiDBLite consensus disorder prediction 158 180 - -
Vivi75g00042 865 SMART it6_source 413 832 IPR015425 -
Vivi75g00042 865 MobiDBLite consensus disorder prediction 47 64 - -
Vivi75g00042 865 MobiDBLite consensus disorder prediction 256 277 - -
Vivi75g00042 865 ProSiteProfiles Formin homology-2 (FH2) domain profile. 413 843 IPR015425 -
Vivi75g00042 865 PANTHER FORMIN-RELATED 15 857 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Vivi75g00042 865 MobiDBLite consensus disorder prediction 347 374 - -
Vivi75g00042 865 Pfam Formin Homology 2 Domain 418 817 IPR015425 -
Vivi75g00042 865 MobiDBLite consensus disorder prediction 158 299 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi75g00042 381 851 FH2 protein (formin) Gene Family AT3G25500 61.633 0.0 576
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi75g00042 - - vun:114175163 929.472