Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi75g00039 ATGGAAGGAGGAGGAGCTCCGCCAGCTGACGCCGTGATGGAGGATGCAGCACCACCGCAACAGCAAGAGCCACAGCAGCAGGTGGGGATGGGGATCGAGAATATTCCGGCTACACTCAGCCACGGTGGGAGGTTCATTCAATACAATATATTCGGTAATATATTTGAAGTTACTGCAAAATACCGACCTCCTATCATGCCAATCGGTAAAGGCGCTTACGGTATTGTTTGCTCTGCTCATAATTCGGAGACGAATGAACATGTTGCTGTCAAGAAGATTGCGAATGCATTTGATAACAAGATTGATGCTAAGAGGACTCTTCGTGAAATCAAGCTGCTTCGCCACATGGATCATGAAAATGTGGTCGCAATCCGGGATATCGTGCCACCACCTCTGCGGGAGGTATTCAATGATGTTTACATTGCATATGAGCTGATGGACACTGATCTTCACCAAATCATTCGATCAAATCAAGCATTATCAGAGGAGCACTGTCAGTATTTTCTGTACCAGATTCTGCGTGGGTTGAAGTACATACATTCCGCGAATGTTTTGCATAGGGACTTAAAACCCAGCAACCTTCTCCTGAATGCCAACTGTGACTTAAAGATTTGTGATTTTGGACTGGCTCGTGTAACCTCTGAAACTGATTTTATGACTGAGTATGTTGTTACAAGATGGTACCGTGCACCAGAGCTTCTGTTGAACTCTTCTGATTACACAGCAGCAATTGATGTCTGGTCTGTTGGTTGTATTTTCATGGAGCTGATGGATCGAAAGCCATTGTTTCCTGGCAGAGATCATGTGCATCAGTTGCGTCTACTCATGGAGCTGATTGGTACCCCATCGGAAGCTGATTTGGGATTTCTTAATGAAAATGCTAAGAGATACATAAGGCAGCTACCTCTTTACCGCCGCCAATCTTTCCAAGAAAAATTTCCGCATGTCCATCCTGATGCTATAGATCTTGTTGAAAAGATGTTAACTTTTGATCCTAGACAAAGACTTACTGTTGAAAATGCGCTGGCACACCCCTACTTGACATCGCTGCATGACATCAGTGACGAACCTGTATGCACGACTCCCTTCAGCTTTGACTTTGAACAGCATGCTTTGACTGAGGAACAGATGAAAGAACTGATATACAGAGAGGCTCTAGCTTTTAACCCCGAGTACCAGCAGTAG 1185 0.4481 MEGGGAPPADAVMEDAAPPQQQEPQQQVGMGIENIPATLSHGGRFIQYNIFGNIFEVTAKYRPPIMPIGKGAYGIVCSAHNSETNEHVAVKKIANAFDNKIDAKRTLREIKLLRHMDHENVVAIRDIVPPPLREVFNDVYIAYELMDTDLHQIIRSNQALSEEHCQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARVTSETDFMTEYVVTRWYRAPELLLNSSDYTAAIDVWSVGCIFMELMDRKPLFPGRDHVHQLRLLMELIGTPSEADLGFLNENAKRYIRQLPLYRRQSFQEKFPHVHPDAIDLVEKMLTFDPRQRLTVENALAHPYLTSLHDISDEPVCTTPFSFDFEQHALTEEQMKELIYREALAFNPEYQQ 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi75g00039 394 FunFam Mitogen-activated protein kinase 47 156 - -
Vivi75g00039 394 FunFam Mitogen-activated protein kinase 146 374 - -
Vivi75g00039 394 MobiDBLite consensus disorder prediction 1 26 - -
Vivi75g00039 394 CDD STKc_TEY_MAPK 55 390 - -
Vivi75g00039 394 Gene3D Phosphorylase Kinase; domain 1 45 384 - -
Vivi75g00039 394 Pfam Protein kinase domain 67 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi75g00039 394 ProSitePatterns Serine/Threonine protein kinases active-site signature. 184 196 IPR008271 GO:0004672|GO:0006468
Vivi75g00039 394 Gene3D Transferase(Phosphotransferase) domain 1 146 374 - -
Vivi75g00039 394 ProSiteProfiles Protein kinase domain profile. 62 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi75g00039 394 ProSitePatterns Protein kinases ATP-binding region signature. 68 92 IPR017441 GO:0005524
Vivi75g00039 394 ProSitePatterns MAP kinase signature. 97 200 IPR003527 GO:0004707|GO:0005524|GO:0006468
Vivi75g00039 394 SUPERFAMILY Protein kinase-like (PK-like) 67 355 IPR011009 -
Vivi75g00039 394 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 60 348 - -
Vivi75g00039 394 SMART serkin_6 62 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi75g00039 1 394 MAP Kinase Gene Family AT2G43790 86.534 0.0 691
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Vivi75g00039 Pkinase 3.9e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi75g00039 K14512 - gmx:547616 749.969