Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi75g00019 ATGTCCGTTTTCGTTGTTACCGCCATGGATTTCGCCGTCCTCGGTTTTCTGGTTCCCTCTCTCTGGGAGATCGAAGTCGCTTTCGTTGCCTCCGTATTCGTTATTCTAATTTATTGGTTCTTCACTTTCAGAACTGGTGACCGTAACTCCGATCGATCGCTTTTGGAGAATTCTGTTGCCGACGCCGACGATAAGGTCAAGATTGGCCTGATCAGAGGAGATTCTCAAGCCGGTTCGGCATACCTGGTTAAGTTAGAACTATTGGCTGCTAAAAATCTGATTGCTGCAAACTTAAACGGAACATCGGATCCTTATGCCATTATTACGTGTGGAAATGAAAAGCGATTCAGTTCTATGGTCCCTGGTTCAAGAAATCCAATGTGGGGCGAGGAGTTCAATTTTAATGTCGATGAACTTCCTGTCCAGATCAATGTCACAATTTTTGATTGGGATATAATTTGGAAAAGTGCTGTTCTTGGTTCAGTGACTGTTCCAGTTGAAATTGAAGGTCAAACTGGTGCTGTGTGGCATACTCTGGATAGCCCATCAGGGCAGGTTTGCCTTCATATAAAAACACACAAGCTATCTGCAAATCCTTCCAGGATAAATGGTTATAGCGGAGCCAACACTCGAAGAAGGATACCCTTGGAAAAACAGGGGCCAACAGTAGTCCATCAAAAGCCAGGACCTCTTCAAACAATATTTGAACTTCATCCAGATGAGGTTGTTGATCATAGTTACTCTTGTGCACTTGAGAGGTCATTCTTGTACCATGGTCGTATGTATGTATCAACATGGCACATTTGTTTCCATTCCAATGTGTTCTCGAAGCAAATGAAGGTGGTTATTCCATTTGAAGATATAGATGAGATTCGAAGGAGTCAACATGCATTTATTAATCCTGCTATAACAATTATTCTTCGTATGGGTGCTGGTGGACACGGTGTCCCTCCTTTGGGAAGTCCCGATGGCAGAGTCAGATATAAGTTTGCATCATTTTGGAACAGAAATCATGCATTTAGAAATCTACAACGTGCAGCTAAGAACTTTTGTGAAAAGTTGGAAACTGAGAAGAAGGAAAATGCTGAGTCAGAATTGCGTGCGCATAGCAGTTCTGTCAGACAAAGTTCCGTAATGGATAAAGTTCCAGAAGCCAGCATGCCGAAAGTTGAAAAACTTAAAACTTTCATCAAAGAAGAAGCTTTAGTTGGTATATACAATGATGTTTTCCCCTGCACAGCTGAGCAGTTTTTCAATTTATTGTTAAAGGATGATTCAAAGTTTACTAGCAAGTATCGCTCAGTACGAAAGGATACTAATCTTGTGATGGGACAGTGGCACACAGCAGAAAAATATGATGGTCAAGTTCGAGAGATAACCTTCAGATCCCTTTGTAACAGCCCTATGTGCCCTCCTGACATAGGCATGACAGAGTGGCAACATGTTGTTCTATCACCAGATAAGAAACACCTGGTGTTTGAGACTGTGCAACAGGCGCATGATGTTCCATTTGGGTCCTATTTTGAGGTGCACTGTAAATGGAGTTTGGAGACAGCCAATGAAAGTTCATGTGCTCTGGACATAAGAGTGGGTGCACATTTCAAGAAATGGTGTGTGATGCAATCCAAAATAAAGTCAGGGGCAATCAATGAGTACAAAAAAGAAGTCGATGTTATGTTAGATGTTGCCCGTTCATATATAAAGTCGTATACTTCAGATGACGAGAATGATAAGGTATCTTCGTCCCCTGCGATGACTTCCGAAAGTTAA 1770 0.4192 MSVFVVTAMDFAVLGFLVPSLWEIEVAFVASVFVILIYWFFTFRTGDRNSDRSLLENSVADADDKVKIGLIRGDSQAGSAYLVKLELLAAKNLIAANLNGTSDPYAIITCGNEKRFSSMVPGSRNPMWGEEFNFNVDELPVQINVTIFDWDIIWKSAVLGSVTVPVEIEGQTGAVWHTLDSPSGQVCLHIKTHKLSANPSRINGYSGANTRRRIPLEKQGPTVVHQKPGPLQTIFELHPDEVVDHSYSCALERSFLYHGRMYVSTWHICFHSNVFSKQMKVVIPFEDIDEIRRSQHAFINPAITIILRMGAGGHGVPPLGSPDGRVRYKFASFWNRNHAFRNLQRAAKNFCEKLETEKKENAESELRAHSSSVRQSSVMDKVPEASMPKVEKLKTFIKEEALVGIYNDVFPCTAEQFFNLLLKDDSKFTSKYRSVRKDTNLVMGQWHTAEKYDGQVREITFRSLCNSPMCPPDIGMTEWQHVVLSPDKKHLVFETVQQAHDVPFGSYFEVHCKWSLETANESSCALDIRVGAHFKKWCVMQSKIKSGAINEYKKEVDVMLDVARSYIKSYTSDDENDKVSSSPAMTSES 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi75g00019 589 ProSiteProfiles VASt domain profile. 401 571 IPR031968 -
Vivi75g00019 589 FunFam BAG-associated GRAM protein 1 isoform X2 230 349 - -
Vivi75g00019 589 PANTHER BAG-ASSOCIATED GRAM PROTEIN 1 11 583 IPR044655 -
Vivi75g00019 589 Gene3D C2 domain 73 196 IPR035892 -
Vivi75g00019 589 ProSiteProfiles C2 domain profile. 62 179 IPR000008 -
Vivi75g00019 589 SMART C2_3c 82 188 IPR000008 -
Vivi75g00019 589 PRINTS C2 domain signature 122 135 IPR000008 -
Vivi75g00019 589 PRINTS C2 domain signature 143 151 IPR000008 -
Vivi75g00019 589 PRINTS C2 domain signature 98 110 IPR000008 -
Vivi75g00019 589 SMART gram2001c 229 295 IPR004182 -
Vivi75g00019 589 Pfam VAD1 Analog of StAR-related lipid transfer domain 405 550 IPR031968 -
Vivi75g00019 589 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 81 191 IPR035892 -
Vivi75g00019 589 CDD C2 83 179 - -
Vivi75g00019 589 Pfam GRAM domain 232 300 IPR004182 -
Vivi75g00019 589 Coils Coil 340 360 - -
Vivi75g00019 589 Gene3D - 230 349 IPR011993 -
Vivi75g00019 589 Pfam C2 domain 84 177 IPR000008 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi75g00019 82 167 C2H2 Transcription Factor Family AT4G21160 25.581 2.00e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi75g00019 - - tpra:123924252 1067.76