Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi75g00017 ATGATAGCTAGCTCCTTCTGCAATGCTGATTCTATGTTTTCTATTGAAGAGGGGATAGATGTTAGAAAGATGATGGAACATAAAAGGACCCTTTGCTCTGTTGATCAAAGCAATTATAATTCAATTGCATCTAAAAAGCAAAAGCCTGATTTATCGATCACCACTAAGGATAGAAAGGAAAAGATTGGTGAACGAGTTGTTGCTCTACAGCAGCTTGTTTCTCCATATGGAAAGACAGATACATCTTCTGTTCTAAAGGAGGCGATGGAATACATAGGGTTCCTTCATAAACAAGTTAAGCTGCTTAGTGCCCCTTATCTCGAAACTACACCAGCAACCCAGATGCAGGATACAGAGTCATGCAGCTTGAGGAGTAGAGGGTTATGTCTTGTTCCTGTATCATTTACTATTGGAGTTGCCGAGGGCAATGGTGCAGACATTTGGGCTCCAATCAAGACCACTTCGCCCGGTTCTGAGAATGATGTTTCTCAAAGTCAGTGA 501 0.4152 MIASSFCNADSMFSIEEGIDVRKMMEHKRTLCSVDQSNYNSIASKKQKPDLSITTKDRKEKIGERVVALQQLVSPYGKTDTSSVLKEAMEYIGFLHKQVKLLSAPYLETTPATQMQDTESCSLRSRGLCLVPVSFTIGVAEGNGADIWAPIKTTSPGSENDVSQSQ 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi75g00017 166 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 46 95 IPR011598 GO:0046983
Vivi75g00017 166 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 43 136 - -
Vivi75g00017 166 FunFam Transcription factor bHLH113 family 45 121 - -
Vivi75g00017 166 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 54 110 IPR036638 GO:0046983
Vivi75g00017 166 Gene3D - 43 117 IPR036638 GO:0046983
Vivi75g00017 166 CDD bHLH_AtbHLH_like 52 103 IPR045239 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi75g00017 24 165 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31730 55.634 6.03e-51 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi75g00017 - - gmx:100809747 276.559