Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi75g00016 ATGATAGCTAGCTCCTTCTGCAATGCTGATTCTATGTTTTCTATTGAAGAGGGGATAGATGTTAGAAAGATGATGGAACATAAAAGGACCCTTTGCTCTGTTGATCAAAGCAATTATAATTCAATTGCATCTAAAAAGCAAAAGCCTGATTTATCGATCACCACTAAGGATAGAAAGGAAAAGATTGGTGAACGAGTTGTTGCTCTACAGCAGCTTGTTTCTCCATATGGAAAGACAGATACATCTTCTGTTCTAAAGGAGGCGATGGAATACATAGGGTTCCTTCATAAACAAGTTAAGCTGCTTAGTGCCCCTTATCTCGAAACTACACCAGCAACCCAGATGCAGGATTGTTTACCTTTGCAGGATACAGAGTCATGCAGCTTGAGGAGTAGAGGGTTATGTCTTGTTCCTGTATCATTTACTATTGGAGTTGCCGAGGGCAATGGTGCAGACATTTGGGCTCCAATCAAGACCACTTCGCCCGGTTCTGAGAATGATGTTTCTCAAAGTCAGTGA 519 0.4143 MIASSFCNADSMFSIEEGIDVRKMMEHKRTLCSVDQSNYNSIASKKQKPDLSITTKDRKEKIGERVVALQQLVSPYGKTDTSSVLKEAMEYIGFLHKQVKLLSAPYLETTPATQMQDCLPLQDTESCSLRSRGLCLVPVSFTIGVAEGNGADIWAPIKTTSPGSENDVSQSQ 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi75g00016 172 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 46 95 IPR011598 GO:0046983
Vivi75g00016 172 Gene3D - 43 117 IPR036638 GO:0046983
Vivi75g00016 172 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 43 142 - -
Vivi75g00016 172 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 54 111 IPR036638 GO:0046983
Vivi75g00016 172 CDD bHLH_AtbHLH_like 52 103 IPR045239 -
Vivi75g00016 172 FunFam Transcription factor bHLH113 family 45 120 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi75g00016 24 159 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G05710 51.572 9.05e-49 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi75g00016 - - gmx:100809747 270.011