Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi75g00015 ATGGCACTGGAAACCCATTCACCGTCTCTTCAGATATTAGTTCGGCGGCCGGAAGAATGCTCGCTATGGACTGGACCCCCATTCCCAAACGGTCAACCTAATGTCAAGCTTGATAAAGTTAATTGCTTGAATGCGAAATTCAGTGATGATGGATCTTTGTTTATGGTGGTGAAATCTAATTCTGTTGTTAGTATTTATGATTGTAAGAGTGCTAATGAGATTAGGTCTTTTCAAGTTCCTAATCTTGTTGCTGCTAGTTTGTCCCCTCGGGGAACTTATTTGCAAACGTTTCAAAAACCTGCGCCGCAAGAAAAGAATGTGACGTTGTGGAAAATCGAGACTGGGGATTCTATTTATCAACTGACTCAGAAGAGTATGACAAGAGTCAATTGGCCTGCAATTCAGTTTAGCTCTGATGAAGCTACTGCGTGCCGCTTGGCAACTAATGAGTTGCAGTTTTTTGATACTGGGGATTTTTCTAAAGGATTTGTTTATCGGTTAAGAGTTCCAGGAGTTGCTTCTGCCGAGCTTTCTAGTTCACCTGCTTCTCATGTAGCTGCATTTGTTCCGGAATCCAAGGGGGTTCCTGCCAGTGTACAAATATATGCTTGTGGAAATGCTTCCCAAAGTCAGCCCGTGGCTCGAAGGAGTTTTTTCCGATGTTCTACTACCCAGCTCAAATGGAATCATGGTTCAACTGGACTTTTAGCCGTGGCACAGTCAGATGTTGATAAAACCAATCAGAGTTACTATGGAGAATCGAAGTTATACTACATAACAACAGATGGGAAATATGAAGGATTAGTGCCTCTTCGGAAAGAGGGGCCTGTTCATGAAGCTCAGTGGTCACATTCAGGCTTAGAGTTTGCTGTTGTGTATGGGTTTATGCCTGCTAAAGCAACTCTGTTTGACAAGAACTGCAATCCTATACTGGAGCTTGGAACTGGTCCTTACAACACTATTCGATGGAACCCAAAAGGGAAATTTCTATGTTTGGCTGGCTTCGGTAACTTGCCTGGTGATATGGTATTTTGGGATTATGTAGAAAAGAAACAGCTTGCGTCAACCAAGGCTGAATGGTCTGTGACTAGTGAATGGTCTCCGGATGGCTGCTATTTCATGACAGCGACAACAGCTCCAAGGCTTCAAGTTGACAATGGGATCAAGATTTTTCATTATAATGGATCATTGTACTTCAAGAAGATGTTTGACAAATTGTACCAGGCTGATTGGAAACCAGAGTCACCGAGTAAGTTTGGTGATATCACTGAACTAATCAAGTCCCTGGACTCGATCAAACTTGAAGATAAAAAACCATCAGGTCAAGGACCAAAACCAGCTCAAGCATCTGCAAAAGTCTCTTCTGCCAATCCTACTGCACAAAAACCTGCCGCATATCGTCCACCACATGCTAAGACTGCAGCTGTTATTAAGGCAGAGCTGTTAGGAGAGAGCTCGGCAGAAACACTGAGCAAGAATGCTTTAAAAAACAAGAAAAAGAGGGAGAAACAAAAGGAGAAAAAGGCTGCTGCAGATGCCAGTTCTTGA 1548 0.4296 MALETHSPSLQILVRRPEECSLWTGPPFPNGQPNVKLDKVNCLNAKFSDDGSLFMVVKSNSVVSIYDCKSANEIRSFQVPNLVAASLSPRGTYLQTFQKPAPQEKNVTLWKIETGDSIYQLTQKSMTRVNWPAIQFSSDEATACRLATNELQFFDTGDFSKGFVYRLRVPGVASAELSSSPASHVAAFVPESKGVPASVQIYACGNASQSQPVARRSFFRCSTTQLKWNHGSTGLLAVAQSDVDKTNQSYYGESKLYYITTDGKYEGLVPLRKEGPVHEAQWSHSGLEFAVVYGFMPAKATLFDKNCNPILELGTGPYNTIRWNPKGKFLCLAGFGNLPGDMVFWDYVEKKQLASTKAEWSVTSEWSPDGCYFMTATTAPRLQVDNGIKIFHYNGSLYFKKMFDKLYQADWKPESPSKFGDITELIKSLDSIKLEDKKPSGQGPKPAQASAKVSSANPTAQKPAAYRPPHAKTAAVIKAELLGESSAETLSKNALKNKKKREKQKEKKAAADASS 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi75g00015 515 PIRSF Transl_init_eIF2A 4 515 IPR011387 GO:0003743|GO:0006413
Vivi75g00015 515 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2A 10 511 IPR011387 GO:0003743|GO:0006413
Vivi75g00015 515 Pfam Eukaryotic translation initiation factor eIF2A 216 409 IPR013979 -
Vivi75g00015 515 Gene3D - 178 424 IPR015943 GO:0005515
Vivi75g00015 515 SUPERFAMILY DPP6 N-terminal domain-like 42 394 - -
Vivi75g00015 515 MobiDBLite consensus disorder prediction 435 471 - -
Vivi75g00015 515 FunFam Eukaryotic translation initiation factor 2A 198 421 - -
Vivi75g00015 515 MobiDBLite consensus disorder prediction 447 461 - -
Vivi75g00015 515 MobiDBLite consensus disorder prediction 488 515 - -
Vivi75g00015 515 Coils Coil 492 512 - -
Vivi75g00015 515 Gene3D - 36 177 IPR015943 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi75g00015 130 417 Eukaryotic Initiation Factors Gene Family AT5G27640 26.490 3.90e-21 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi75g00015 K15026 - gmx:100811589 860.907