Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi757g00006 ATGGTTGATTTGTTGAAAGAATACGTGGATGTTTTTGCTTGGAGCTATCAAGATATGCCTGGATTGGATATCACTATTGTAGAGCAGAGATTACTGTTAAAGCTAGAATGTCCTCCTTTTAAGCAAAAGTTAAGAAGAACTCACCCAGATATGGTAGACAAGATTAAAGAAGAGGTACACAAGCAAATCAACGCTGCTGCTGCTTCCCCCAATTTAGTTTTGGTTATTGAGCTTTGCAGTACTTACCCAAAAGGACTAAGAGCTTGTCTTCTTGTGCCTCAAAATGACTTCCACAATGATGTTAACAATTTTACAGAAGTAGGAGGGACTGTTGTGGACGGTCAAATTTGTCATCCAAGAAATTATGACTTCTATATGTGTGCTCATGCAGGAATGAATGCATATGAAATCAGTCTTGCCTCTAAAATTCCTTTGGAGGCTATTGCTAATGCCTTAAAGAGGAATGAGATAGAGAATTATCAACCAGCCAATGGGGACCCTTCTTCTCAACTCATGGTAAAGCCGGAGGCAACAACTGGTTTGTCTCATGGTGGAAAAAGTGGAGAATCTTTTTCTTCACTCTCGATTTCTATATATATGAGAACAAGATCTGCGGCACGAATTGTTAACAATGACCATTCTGATGATTTTGTTACAATCATAGAGGAAGACGTAAATGATCGTACTGCTGCAGTTGGGACTGAAGAGGCAGAGGATGGATTTGCTGACATGAGAAATAAGAAAGGCAAAAGAACTTCATCAAATATATTGCATAGAAATATGAGAACAAGATCTGCGGCACGAATTGACAACAATGACCATACTGCTGCAGTTGGGACAGAAGAGGAAGACTTGAATGATCATACTGGTGCAGTTGGGACAGAAGAGGAAGAGGATGGAAGTGCTGACATGAGAAATAAGAAAGGCAAAAAAACATCATCAAGAATATTGCATAGGTGTTTCCCTAAGAAGCTGACAGAATTAGTTTTGTTGTTGAACGAGGGAAAGAAAGATCCTAGGAAGAAAGAAGACTGTATTAAGAAAGAGAAGTATATTACGGAATGTGGATTTGGTGGATTGTTAAAACTGAACATCACCATTATCCCGGGGGTATTTGTAAGTTGGATTTTAGATAACTTTGACGAACATAGGGGAATGATTGTCAATGAAAATGCAAGAATTACAGTTGGAGAAGAAGATGTGAAGAGGGTATATGATTTGCCAAGGGGTAAGAAGATAATTGATTTGGAAAAGGTTGACAAATCAAGTAAAGAAAAGGTGAAGAAATTTAAGGAGCAGCTCGGGTACATAGGGGAGACTTATGATAGTATGATCCACATACATACCAATGTTTTGTATGAAAAATTGATGAATTTTGAAATCACAAAGAACAAAGCTTGGGCAAAAGGTTTTATATTATTGGCTATCGGAACCATTCTTTGCCCTACTACTTCATACTTGATTAGTTTGAACTATGCTACAGTGTTGAGCGAAGTAAAGAAAGTTAGTAGCTACAACTGGTGTCAACACTTAATTCAACATGCCAACGGAGGGATTAAGAAAGATGCATGTTCTGGGAAAGCAGACTTCCACTTTCTTCTAGTACATTTTTTAGATATGGTGCAAACAACCAAACAAAAGGAAATAGTTGAAAAAGCACCAAGTTGTGGAAATTGGGAGGATGGCAATGTGAGCATGGAGTTGAAGAAAATAAAGAAGAAGGGAGGTTTCAACAAGGTGATCATTCTTGATAAACAAGATTGTGATATTCCAGAAAGTAGTATGGCAGCAAAAGACATGGGTGATGAAGTGATGCATGACAAAATTGCTGAGACTGCAAAACGTAGTAGAGAGAAAGTGATCCAAAGAAAAGGGAAAAAGCGAAAGACACAAAATGTGGATAATGAAATGATGGAGGCTCATTTGGCTCCACAAGACTACGCATTAGAAGAGGCTAAAAAACAAATAAAAATTTGTGATGAAAAGCTGAAGTTTTGGGCAGATTGGAAGACTTATTGGGTCAAACAGGCAGAGGAAGCCGAGTCTTCAATGAGAAAAGGAAAAGAAGTTGGAGAAAAGGAGCATCGTTCTAATACGGAAAAAGAAGTTGGAGATAAAGAGGATGCTGCACATGAGCCTAGAAATGCAAGTCCTGAATTGGTTGAGAGTGAAGACAATGATTCGGATCATGGGCTTGAAGAACAAGCTGCAAATTTAGTTGATAAAGAGGATGATGCAGAACAGCCCGGAAAAAAAGATGATGCAAATCAGCCTGAAAAAGAAAGTCAAGAGAAGCATGGTGATACAGCTGAGATGAATGATTCTGATTGGGGTCAGCCTTCTTTTAGTCTAGGATTCAGTACTCCTATATCATTGGAAGAAAGTAGAAAGTCACCATCTGATGTGGCAACATACACACTTATGGAGAACATACCACAAAATGAACAGATTCCGCTTCCAAAAAGGATCTCAGCATTGTCACAATACTTTAGATCCCCATATGTAATGCAAATGAAGAAGGCAAAATTGAGTGAGGAAGACACACAATTGGTCAACTATGCATGGACATTGGCAGAAGCAAATGGAGGAGCTATGGAGGTATTGTTCCAAGACAAATGCAAGATGTTAGACAACCTTAACAGGGGATCCTTATTTTGTCTCAAGAAGGATTGTAAGTTAGAGGGGGATGTCATTGGAAACTATTTTAGTTTCTTGAATAAAAAAGAGATGATGAAAGGAAAGATGAAAAGGTTGATATTCCCGGTTACATATGAATTTGAGCATGGCGTCAAGATCACTAGACGCAAAAAGGATCATAGAGAAGCCCATGTAGTGGCCGAGTATGCAGAAGATTTAATAAGACAGCTCAAATACATGGATTTTAATGATATAGACGTGGAAAATCCTGAATATTGGTTTTTCCCAGTTTATTTGAAGAGTCACTATGCTGCATATGTGATTGATTTCAAAGAACAGAGGTTCGGATTTCTGAATAGTTGTGAAAGGTTCACATTTCGAAAAGAAGATGAATGGGACAACTGGGGGAAGTGGAAAGTGAGATATGGGATGGAGTTGATAAATGCTAAGAGAAATGAACCTATAGACTTTAGTCAATGGAGTTGGGAGGATGTGAATTTGCCTTTACAACATGATAGGAAATCATGCGGGCTATTTGTTCTGACATATATTGAGAAATGGGATAGCAAGCAAGCTGCAATTTGGGATTTTTTTAAGCATTGGGATATGATGACAAATGAAGAGCAAGATGATTTTATGGAGATTCAAAGAGTAAAAGTGTTGCTAGACATCTTGAAGCGTGAGGACAATGAGTTGCTTCAAAACTTGACAAAGTTAGCTCTGACATTGGCTGAAGAAGAGGCTGCATGTGCTATGGAGGATGACTTGGAGAAAGAAGCAGAGAAGAACAAAAAAAAGGTGAAGACAAAGAAGTCAGCCCCTAACTTGGGTGAAGAAGAGGAAGAATGTTCTATGGCACAAGTCCTTGAGAAAGAAGCCGGGAAGAAGACAAAAAAACATAGGACAAAAAGGAAAAAAACTCTATATTGA 3567 0.3838 MVDLLKEYVDVFAWSYQDMPGLDITIVEQRLLLKLECPPFKQKLRRTHPDMVDKIKEEVHKQINAAAASPNLVLVIELCSTYPKGLRACLLVPQNDFHNDVNNFTEVGGTVVDGQICHPRNYDFYMCAHAGMNAYEISLASKIPLEAIANALKRNEIENYQPANGDPSSQLMVKPEATTGLSHGGKSGESFSSLSISIYMRTRSAARIVNNDHSDDFVTIIEEDVNDRTAAVGTEEAEDGFADMRNKKGKRTSSNILHRNMRTRSAARIDNNDHTAAVGTEEEDLNDHTGAVGTEEEEDGSADMRNKKGKKTSSRILHRCFPKKLTELVLLLNEGKKDPRKKEDCIKKEKYITECGFGGLLKLNITIIPGVFVSWILDNFDEHRGMIVNENARITVGEEDVKRVYDLPRGKKIIDLEKVDKSSKEKVKKFKEQLGYIGETYDSMIHIHTNVLYEKLMNFEITKNKAWAKGFILLAIGTILCPTTSYLISLNYATVLSEVKKVSSYNWCQHLIQHANGGIKKDACSGKADFHFLLVHFLDMVQTTKQKEIVEKAPSCGNWEDGNVSMELKKIKKKGGFNKVIILDKQDCDIPESSMAAKDMGDEVMHDKIAETAKRSREKVIQRKGKKRKTQNVDNEMMEAHLAPQDYALEEAKKQIKICDEKLKFWADWKTYWVKQAEEAESSMRKGKEVGEKEHRSNTEKEVGDKEDAAHEPRNASPELVESEDNDSDHGLEEQAANLVDKEDDAEQPGKKDDANQPEKESQEKHGDTAEMNDSDWGQPSFSLGFSTPISLEESRKSPSDVATYTLMENIPQNEQIPLPKRISALSQYFRSPYVMQMKKAKLSEEDTQLVNYAWTLAEANGGAMEVLFQDKCKMLDNLNRGSLFCLKKDCKLEGDVIGNYFSFLNKKEMMKGKMKRLIFPVTYEFEHGVKITRRKKDHREAHVVAEYAEDLIRQLKYMDFNDIDVENPEYWFFPVYLKSHYAAYVIDFKEQRFGFLNSCERFTFRKEDEWDNWGKWKVRYGMELINAKRNEPIDFSQWSWEDVNLPLQHDRKSCGLFVLTYIEKWDSKQAAIWDFFKHWDMMTNEEQDDFMEIQRVKVLLDILKREDNELLQNLTKLALTLAEEEAACAMEDDLEKEAEKNKKKVKTKKSAPNLGEEEEECSMAQVLEKEAGKKTKKHRTKRKKTLY 1188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi757g00006 1188 MobiDBLite consensus disorder prediction 1134 1163 - -
Vivi757g00006 1188 Gene3D - 89 139 IPR036397 GO:0003676
Vivi757g00006 1188 Gene3D Adenoviral Proteinase; Chain A 858 1107 - -
Vivi757g00006 1188 MobiDBLite consensus disorder prediction 1169 1188 - -
Vivi757g00006 1188 ProSiteProfiles Ubiquitin-like protease family profile. 865 1066 IPR003653 GO:0006508|GO:0008234
Vivi757g00006 1188 PANTHER OS07G0283600 PROTEIN-RELATED 323 586 - -
Vivi757g00006 1188 MobiDBLite consensus disorder prediction 679 787 - -
Vivi757g00006 1188 MobiDBLite consensus disorder prediction 269 311 - -
Vivi757g00006 1188 Pfam Ulp1 protease family, C-terminal catalytic domain 911 1065 IPR003653 GO:0006508|GO:0008234
Vivi757g00006 1188 SUPERFAMILY Cysteine proteinases 878 1072 IPR038765 -
Vivi757g00006 1188 MobiDBLite consensus disorder prediction 269 310 - -
Vivi757g00006 1188 MobiDBLite consensus disorder prediction 679 772 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi757g00006 91 134 Eukaryotic Initiation Factors Gene Family AT1G48410 47.917 2.74e-06 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi757g00006 - - vvo:131636109 2313.49